Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 OR5BN1P-201ENST00000532955 829 ntBASIC4.5□□□□□ -1.69
KCMF1Q9P0J7 AC078814.3-201ENST00000553036 491 ntBASIC4.5□□□□□ -1.69
KCMF1Q9P0J7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.5□□□□□ -1.69
KCMF1Q9P0J7 MIR4270-201ENST00000581799 70 ntBASIC4.5□□□□□ -1.69
KCMF1Q9P0J7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.5□□□□□ -1.69
KCMF1Q9P0J7 AC243960.4-201ENST00000600532 288 ntBASIC4.5□□□□□ -1.69
KCMF1Q9P0J7 AL355812.1-201ENST00000603215 216 ntBASIC4.5□□□□□ -1.69
KCMF1Q9P0J7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.5□□□□□ -1.69
KCMF1Q9P0J7 AC010591.1-201ENST00000603941 649 ntBASIC4.5□□□□□ -1.69
KCMF1Q9P0J7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.5□□□□□ -1.69
KCMF1Q9P0J7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.5□□□□□ -1.69
KCMF1Q9P0J7 AC093913.1-201ENST00000614178 329 ntBASIC4.5□□□□□ -1.69
KCMF1Q9P0J7 NXPH1-205ENST00000602349 1953 ntBASIC4.5□□□□□ -1.69
KCMF1Q9P0J7 PABPC1P7-201ENST00000413177 1513 ntBASIC4.5□□□□□ -1.69
KCMF1Q9P0J7 MAPK10-304ENST00000641341 3984 ntBASIC4.5□□□□□ -1.69
KCMF1Q9P0J7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.5□□□□□ -1.69
KCMF1Q9P0J7 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.5□□□□□ -1.69
KCMF1Q9P0J7 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
KCMF1Q9P0J7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 HSPE1P11-201ENST00000339579 310 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AC067945.1-201ENST00000342609 618 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 RN7SKP115-201ENST00000363177 317 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AC019155.1-201ENST00000382242 574 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AL590762.2-201ENST00000395798 571 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AL122016.1-201ENST00000403365 367 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 RNU6-516P-201ENST00000411381 104 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 OR2AS1P-201ENST00000427827 319 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AC005154.2-201ENST00000438110 379 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 MTND6P18-201ENST00000439477 513 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 MRPL50P4-201ENST00000446432 475 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 PTMAP3-201ENST00000447474 330 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AL118496.2-201ENST00000448300 230 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AC126389.1-201ENST00000477436 290 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 RN7SKP276-201ENST00000516242 268 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 RNU7-30P-201ENST00000516835 62 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 RN7SKP234-201ENST00000517173 224 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 SUMO2P20-201ENST00000520803 283 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AC067852.4-201ENST00000590314 478 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 MIR6820-201ENST00000611508 62 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AC079684.1-201ENST00000621405 437 ntBASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KCMF1Q9P0J7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 MAPK10-286ENST00000641208 8747 ntBASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 AL442639.1-201ENST00000625030 1899 ntBASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 SALL4P2-201ENST00000423288 2910 ntBASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 RNU6-263P-201ENST00000363811 107 ntBASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 RNU6-432P-201ENST00000384196 109 ntBASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 RNU1-82P-201ENST00000390851 165 ntBASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 RNU6-821P-201ENST00000390995 107 ntBASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 CYB5AP4-201ENST00000396692 399 ntBASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 AL356057.2-201ENST00000403318 432 ntBASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 FAT1P1-201ENST00000406588 507 ntBASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 RNU2-39P-201ENST00000410604 198 ntBASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 EIF4A1P3-201ENST00000411521 244 ntBASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 AC092447.6-201ENST00000414578 210 ntBASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 AL391219.1-201ENST00000422570 483 ntBASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 DUTP6-201ENST00000425573 462 ntBASIC4.48□□□□□ -1.69
KCMF1Q9P0J7 SRIP2-201ENST00000428470 166 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms