Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CUEDC1Q9NWM3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AC005005.4-201ENST00000623789 16698 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AC087516.1-201ENST00000561236 2428 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 RNU6-704P-201ENST00000364162 103 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 RN7SKP292-201ENST00000365522 317 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 RNU6-434P-201ENST00000384376 107 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 RNU6-393P-201ENST00000384475 107 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 MRPL35P1-201ENST00000404272 572 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 RN7SKP286-201ENST00000410894 299 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 RPS27AP12-201ENST00000429552 465 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AC005077.1-201ENST00000449226 375 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AL136097.1-201ENST00000456945 913 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AC087884.1-201ENST00000469738 328 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AC117503.1-201ENST00000472241 394 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AC105384.2-201ENST00000508433 640 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AC067942.3-201ENST00000512025 362 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 RNU6-1092P-201ENST00000516955 87 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AC109329.1-201ENST00000518744 317 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AC025884.1-201ENST00000556034 378 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AL138889.2-201ENST00000603883 242 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AC010900.2-201ENST00000604508 210 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 NANOGP3-201ENST00000605855 286 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AL049794.2-201ENST00000616301 365 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 ZNF72P-201ENST00000425869 1908 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 AC025470.1-201ENST00000510053 2032 ntBASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
CUEDC1Q9NWM3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 Y_RNA.183-201ENST00000363882 113 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 RNU6-188P-201ENST00000364207 107 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 RNA5SP211-201ENST00000365516 117 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 RNY1P5-201ENST00000383890 115 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 RNU6-356P-201ENST00000384140 107 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 HMGB1P20-201ENST00000402555 677 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 MIR1178-201ENST00000408396 91 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 RPL21P109-201ENST00000422213 475 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 AC096920.1-201ENST00000423991 241 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 RPS7P3-201ENST00000443360 580 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 SNORD121B-201ENST00000458838 81 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 snoU13.29-201ENST00000459370 104 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 RPS29P26-201ENST00000477483 171 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 RN7SL591P-201ENST00000496150 292 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 RPL23AP55-201ENST00000498163 452 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 RNU6-397P-201ENST00000516226 104 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 RN7SKP288-201ENST00000516227 268 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 IGKV2-18-201ENST00000522607 343 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 AC109446.1-201ENST00000566172 220 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms