Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AC067945.1-201ENST00000342609 618 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 RNU1-108P-201ENST00000362556 161 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 Y_RNA.70-201ENST00000362886 110 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 Y_RNA.160-201ENST00000363677 92 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 SNORA69-201ENST00000383895 132 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 RNU1-63P-201ENST00000383902 164 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 MIR124-3-201ENST00000384866 87 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 MT-TL1-201ENST00000386347 75 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 RNU6-1158P-201ENST00000391167 107 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 FGF7P8-201ENST00000402994 292 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AC138393.2-201ENST00000414742 246 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 SSXP9-201ENST00000417503 292 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AC016712.1-201ENST00000431088 378 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 SEPT14P3-201ENST00000439401 183 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AL732372.2-207ENST00000445840 183 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AC073587.1-201ENST00000447093 876 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 MTND5P20-201ENST00000448677 143 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 SEPT14P2-201ENST00000453405 183 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AC083798.1-201ENST00000472671 131 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 RPS15AP36-201ENST00000492022 382 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 SEPT14P4-201ENST00000513445 186 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 RNU7-51P-201ENST00000516560 62 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 FO082796.1-201ENST00000523795 183 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 FAM60DP-201ENST00000524174 632 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 HMGB3P26-201ENST00000560051 582 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 HMGB1P6-201ENST00000569046 646 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AC105224.1-201ENST00000587055 421 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AC060780.3-201ENST00000589464 80 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AC069234.5-201ENST00000611056 416 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 Y_RNA.804-201ENST00000615262 101 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AL354950.2-201ENST00000617939 290 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AL161637.1-201ENST00000622380 412 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 SDAD1P1-202ENST00000524156 2051 ntBASIC4.18□□□□□ -1.74
RLIMQ9NVW2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
RLIMQ9NVW2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 OR52B1P-201ENST00000316506 909 ntBASIC4.17□□□□□ -1.74
RLIMQ9NVW2 RNU6-223P-201ENST00000362830 107 ntBASIC4.17□□□□□ -1.74
RLIMQ9NVW2 SNORA71.2-201ENST00000364941 134 ntBASIC4.17□□□□□ -1.74
RLIMQ9NVW2 RNA5SP22-201ENST00000365393 109 ntBASIC4.17□□□□□ -1.74
RLIMQ9NVW2 Y_RNA.367-201ENST00000365544 101 ntBASIC4.17□□□□□ -1.74
RLIMQ9NVW2 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 RNU1-44P-201ENST00000384453 163 ntBASIC4.17□□□□□ -1.74
RLIMQ9NVW2 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 RNU2-36P-201ENST00000410361 191 ntBASIC4.17□□□□□ -1.74
RLIMQ9NVW2 RN7SKP216-201ENST00000411050 312 ntBASIC4.17□□□□□ -1.74
RLIMQ9NVW2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 BEND7P1-201ENST00000422058 457 ntBASIC4.17□□□□□ -1.74
RLIMQ9NVW2 EIF4EP1-201ENST00000422311 642 ntBASIC4.17□□□□□ -1.74
RLIMQ9NVW2 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 ATP5JP1-201ENST00000431631 322 ntBASIC4.17□□□□□ -1.74
RLIMQ9NVW2 RPS20P5-201ENST00000434808 360 ntBASIC4.17□□□□□ -1.74
RLIMQ9NVW2 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 AC092324.1-201ENST00000468671 324 ntBASIC4.17□□□□□ -1.74
RLIMQ9NVW2 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 RPS26P28-201ENST00000470806 348 ntBASIC4.17□□□□□ -1.74
RLIMQ9NVW2 RPL12P20-201ENST00000475538 479 ntBASIC4.17□□□□□ -1.74
RLIMQ9NVW2 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.17□□□□□ -1.74
RLIMQ9NVW2 AC233702.1-201ENST00000482905 502 ntBASIC4.17□□□□□ -1.74
RLIMQ9NVW2 AC008628.2-201ENST00000502605 298 ntBASIC4.17□□□□□ -1.74
RLIMQ9NVW2 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms