Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 NPM1P10-201ENST00000398310 865 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AL355615.1-201ENST00000406187 641 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 MIR1290-201ENST00000408735 78 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 RNU2-43P-201ENST00000410306 190 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 RPL26P29-201ENST00000415623 438 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 KRR1P1-201ENST00000419430 803 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC069157.1-201ENST00000421749 137 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 BEND7P1-201ENST00000422058 457 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AL139247.1-201ENST00000422768 325 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 RAC1P8-201ENST00000427086 527 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 BMI1P1-201ENST00000445879 941 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AL513328.1-201ENST00000446460 224 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AL592447.1-201ENST00000447592 540 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 OR2AF1P-201ENST00000454899 889 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 CDC42P1-201ENST00000456658 548 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 UBDP1-202ENST00000457888 382 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 RPS3AP41-201ENST00000462701 778 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC003982.1-202ENST00000469928 248 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC128713.1-201ENST00000471495 306 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 SSX6-203ENST00000509958 336 ntTSL 3 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC091826.1-201ENST00000514065 313 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 SNORD46.2-201ENST00000516021 102 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 RNU6-885P-201ENST00000516607 104 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 RNU7-193P-201ENST00000516723 65 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 RNA5SP135-201ENST00000517019 125 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 SNORA31.22-201ENST00000517204 135 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 PTS-202ENST00000524931 696 ntTSL 3 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AP000916.1-201ENST00000533869 835 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 HPRT1P3-201ENST00000539521 576 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 CR383656.7-201ENST00000548164 174 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC022306.1-201ENST00000560489 1562 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 OR4K8P-201ENST00000578842 1048 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC015726.1-201ENST00000602353 681 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AL121917.1-203ENST00000605534 577 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AL450270.1-201ENST00000606160 391 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AL445423.1-201ENST00000609941 536 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AP001486.3-201ENST00000615334 372 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AL162233.1-201ENST00000620014 944 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AC008432.1-201ENST00000615912 1320 ntBASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CDC42SE1Q9NRR8 ZNF849P-201ENST00000594711 1566 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 OR1S2-201ENST00000302592 978 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 RNU1-32P-201ENST00000363937 159 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 SNORA55-201ENST00000364587 135 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 RN7SKP275-201ENST00000364626 301 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 OR1L1-202ENST00000373686 1083 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 MIR325-201ENST00000385260 98 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AL356057.1-202ENST00000402263 756 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 RPL7P25-201ENST00000404151 721 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 RNU4-6P-201ENST00000410804 122 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AL030996.1-201ENST00000411430 235 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 SPA17P1-201ENST00000416656 452 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 SEPT2P1-201ENST00000419651 180 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 RPL24P2-201ENST00000421023 475 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AL139413.1-201ENST00000421309 217 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 CR848007.2-201ENST00000424918 787 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 PSMA6P3-201ENST00000428242 164 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AC241584.1-201ENST00000438469 1241 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms