Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 RPS15AP40-201ENST00000419621 391 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 AKR1B10P1-201ENST00000425765 942 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 HMGB1P27-201ENST00000431429 603 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 USP9YP7-201ENST00000436723 430 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 USP9YP32-201ENST00000452432 430 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 Y_RNA.650-201ENST00000459002 102 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 RPS27AP13-201ENST00000498403 237 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 MRPS33P2-201ENST00000507850 322 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 AC074133.1-201ENST00000515696 183 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 RNU2-31P-201ENST00000516954 155 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 Y_RNA.777-201ENST00000516982 102 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 EIF4A2P5-201ENST00000529914 499 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 AC091078.2-201ENST00000557145 559 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 MIR4675-201ENST00000577898 77 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 Y_RNA.771-201ENST00000598668 102 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 AC123912.5-201ENST00000605470 343 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 SNORD91B-202ENST00000608459 222 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 Y_RNA.789-201ENST00000622480 102 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 AC100778.3-201ENST00000580060 1750 ntBASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 COX6B1P3-201ENST00000312310 260 ntBASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 Y_RNA.275-201ENST00000364726 110 ntBASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 RNU6-215P-201ENST00000365169 102 ntBASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 SNORA70.9-201ENST00000384370 135 ntBASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 Y_RNA.534-201ENST00000384599 112 ntBASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 AL096701.2-201ENST00000416920 238 ntBASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 FHP1-201ENST00000442741 703 ntBASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 RPL5P7-201ENST00000444235 813 ntBASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 AC079354.2-201ENST00000453523 154 ntBASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 AC104339.1-201ENST00000465478 348 ntBASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 HMGB1P25-201ENST00000468402 607 ntBASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 AC018442.3-201ENST00000523025 183 ntBASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 AC107958.1-201ENST00000556576 290 ntBASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 AC091895.1-201ENST00000624494 256 ntBASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 AC138907.8-201ENST00000623981 2256 ntBASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PRDM9Q9NQV7 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 AC109446.4-201ENST00000623235 2755 ntBASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 AC013442.1-201ENST00000397347 228 ntBASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 AC063979.1-201ENST00000415539 377 ntBASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 AC073587.1-201ENST00000447093 876 ntBASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.85□□□□□ -1.47
PRDM9Q9NQV7 Y_RNA.638-201ENST00000459374 113 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms