Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 MIR200C-201ENST00000384980 68 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 SNORA48.8-201ENST00000391324 134 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 AL136372.1-201ENST00000403060 228 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 SNORA11-201ENST00000408789 128 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 RNU4-22P-201ENST00000411058 166 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 BX323014.1-201ENST00000412876 237 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 AC109780.2-201ENST00000413467 845 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 MTATP6P20-201ENST00000414147 562 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX47Q9H0S4 RPS3AP37-201ENST00000419176 745 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.32□□□□□ -1.88
DDX47Q9H0S4 SDCBPP3-201ENST00000419629 891 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.32□□□□□ -1.88
DDX47Q9H0S4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX47Q9H0S4 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX47Q9H0S4 RPS12P18-201ENST00000442381 270 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 AL589880.1-201ENST00000448271 287 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.32□□□□□ -1.88
DDX47Q9H0S4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.32□□□□□ -1.88
DDX47Q9H0S4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX47Q9H0S4 RPL21P13-201ENST00000488305 481 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 RPL21P129-201ENST00000491732 478 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 CBX3P3-201ENST00000508108 532 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 MTATP6P9-201ENST00000515039 680 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 RNY4P37-201ENST00000516225 96 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 SNORA67.7-201ENST00000516664 135 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 TRMT10BP1-201ENST00000519377 943 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 OR4T1P-201ENST00000554933 911 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX47Q9H0S4 MTCYBP23-201ENST00000558717 1102 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX47Q9H0S4 AC053481.3-201ENST00000577881 843 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 MIR4474-201ENST00000579189 78 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 MIR1254-2-201ENST00000579553 63 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 AL160237.3-201ENST00000604114 1013 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 AL139022.2-201ENST00000606934 443 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 AL136370.1-201ENST00000608166 691 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 AC006133.1-201ENST00000617106 264 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 AC010608.3-201ENST00000625048 527 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.32□□□□□ -1.88
DDX47Q9H0S4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
DDX47Q9H0S4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX47Q9H0S4 ZNF807-201ENST00000328088 1707 ntBASIC3.32□□□□□ -1.88
DDX47Q9H0S4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
DDX47Q9H0S4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 RNU6-560P-201ENST00000364007 108 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 RNU6-882P-201ENST00000391025 103 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 SNORA48.7-201ENST00000391302 135 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 HMGB1P17-201ENST00000403495 628 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AL136310.1-201ENST00000404926 654 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 U3.42-201ENST00000408746 214 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 MTATP6P27-201ENST00000416987 621 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AL356320.2-201ENST00000417263 507 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 SSXP9-201ENST00000417503 292 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 RPL21P32-201ENST00000419877 477 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 HSFY7P-201ENST00000432672 318 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 OR2B8P-201ENST00000432841 938 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 HSFY8P-201ENST00000437934 318 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AC004866.2-201ENST00000438285 481 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 EEF1A1P39-201ENST00000440791 250 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 HSPE1P28-201ENST00000443139 211 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 RPL21P23-201ENST00000446654 460 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 MTCO2P25-201ENST00000447065 681 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AC007327.1-201ENST00000447461 264 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 HSFY5P-201ENST00000453726 309 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 PTGES3P5-201ENST00000455109 434 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AC093663.1-201ENST00000497190 394 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AC118282.1-201ENST00000506408 765 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AC006499.2-201ENST00000513470 337 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AC022861.1-201ENST00000522981 663 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 MIR4276-201ENST00000584832 70 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 CCDC58P3-201ENST00000590792 430 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 BNIP3P26-201ENST00000600827 554 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 BNIP3P11-201ENST00000603878 563 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AL031176.1-201ENST00000604554 466 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AC106900.2-201ENST00000604994 317 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AC106028.5-201ENST00000610332 395 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AL157817.1-201ENST00000614264 790 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AC243312.2-201ENST00000623340 601 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AC012442.3-202ENST00000636742 206 ntBASIC3.31□□□□□ -1.88
DDX47Q9H0S4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms