Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC022616.3-201ENST00000523940 148 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC090616.5-202ENST00000582111 297 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 KC877982.1-201ENST00000602313 470 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC073091.2-201ENST00000603205 907 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC020910.2-201ENST00000603635 610 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 BNIP3P9-201ENST00000603714 553 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC007621.1-201ENST00000604544 437 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 OR6R2P-201ENST00000609216 300 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC093788.1-201ENST00000609356 927 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC131238.1-201ENST00000617135 328 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 MIR6853-201ENST00000619642 74 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 MIR3662-201ENST00000637030 95 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC139769.1-204ENST00000472297 1931 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 ZNF734P-201ENST00000419494 1534 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 RNU6-1120P-201ENST00000362988 108 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 RNU6-1097P-201ENST00000363586 107 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 RNU6-694P-201ENST00000364071 147 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 RNU1-39P-201ENST00000383897 165 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 RPS4XP8-201ENST00000402039 771 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 ELOCP4-201ENST00000420090 333 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 UQCRBP1-201ENST00000421129 336 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC092832.1-201ENST00000422934 400 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC137499.1-201ENST00000427602 88 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 MTND3P23-201ENST00000431980 347 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 RAD23BP3-201ENST00000454157 1152 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 SNORD121B-201ENST00000458838 81 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC025445.1-201ENST00000502728 300 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC005798.1-201ENST00000513715 387 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 RNA5SP337-201ENST00000517007 109 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AP003072.2-201ENST00000527756 676 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 OR5BC1P-201ENST00000529327 739 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC060780.3-201ENST00000589464 80 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 BPIFA4P-203ENST00000603168 689 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC025449.1-201ENST00000603896 529 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC091925.2-201ENST00000625059 256 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 FER-210ENST00000628534 558 ntTSL 5 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 LINC00622-201ENST00000562811 1570 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 IQCB2P-201ENST00000401788 1633 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 AC011266.1-201ENST00000624119 3569 ntBASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
AMBRA1Q9C0C7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
AMBRA1Q9C0C7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
AMBRA1Q9C0C7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.16□□□□□ -1.74
AMBRA1Q9C0C7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.16□□□□□ -1.74
AMBRA1Q9C0C7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
AMBRA1Q9C0C7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
AMBRA1Q9C0C7 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.16□□□□□ -1.74
AMBRA1Q9C0C7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
AMBRA1Q9C0C7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms