Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 SULT1C2P2-201ENST00000562517 294 ntBASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 AC011447.4-201ENST00000587562 111 ntBASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 AC006116.10-201ENST00000591836 581 ntBASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 AC008782.1-201ENST00000603386 430 ntBASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 AC136443.5-201ENST00000603741 370 ntBASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 AC005191.1-201ENST00000603950 358 ntBASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 AL080274.1-201ENST00000605565 220 ntBASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 AP001521.2-201ENST00000608772 546 ntBASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 AC103710.2-201ENST00000609912 942 ntBASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 AC093799.2-201ENST00000610062 578 ntBASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 EIF3FP1-201ENST00000613970 806 ntBASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 Z95327.2-201ENST00000414579 1873 ntBASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 LINC01109-201ENST00000603837 3081 ntBASIC5.08□□□□□ -1.6
FOXP3Q9BZS1 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AC009643.2-201ENST00000603543 1448 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 Y_RNA.146-201ENST00000363549 102 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 Y_RNA.301-201ENST00000364990 103 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 RN7SKP114-201ENST00000410327 279 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AL360081.1-201ENST00000428299 555 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 MED13P1-201ENST00000428342 171 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 FHP1-201ENST00000442741 703 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 KNOP1P3-201ENST00000446933 426 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AL354710.1-201ENST00000453641 246 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 RNU7-152P-201ENST00000458982 64 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 RN7SL860P-201ENST00000473738 223 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 RPL23AP11-201ENST00000475260 469 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AC012181.1-201ENST00000479895 423 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AC007686.1-201ENST00000488511 463 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 HMGB3P15-201ENST00000507326 574 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AC110792.2-201ENST00000510278 224 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 snoU109.6-201ENST00000516831 118 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AC011979.2-201ENST00000527568 352 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AC006270.2-201ENST00000578523 652 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AP001330.4-201ENST00000604350 154 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AC080078.3-201ENST00000605407 463 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AC245517.5-201ENST00000611529 162 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 uc_338.15-201ENST00000615470 191 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 AC139713.2-215ENST00000641428 5037 ntBASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
FOXP3Q9BZS1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 MTND5P16-201ENST00000460269 1703 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 HSPE1P11-201ENST00000339579 310 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 RNU6-552P-201ENST00000362869 119 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 RNA5SP391-201ENST00000363456 119 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 U3.11-201ENST00000364476 212 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 RNA5SP455-201ENST00000365190 119 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 RNU4-66P-201ENST00000365199 138 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 SNORA66-201ENST00000384792 133 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 RNU6-903P-201ENST00000391270 109 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 SSXP10-201ENST00000402595 565 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 GJA6P-201ENST00000415117 1042 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 AL161631.1-201ENST00000417933 486 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms