Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNU6-859P-201ENST00000362728 107 ntBASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 RN7SKP192-201ENST00000411291 327 ntBASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 HMGN2P35-201ENST00000412164 270 ntBASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 LINC01347-201ENST00000417964 355 ntBASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 SNRPEP4-201ENST00000435815 279 ntBASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 snoU13.23-201ENST00000458863 104 ntBASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 ANXA2P1-201ENST00000505539 926 ntBASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 AC026412.2-201ENST00000512270 1075 ntBASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 AC133963.2-201ENST00000513686 578 ntBASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 AC243972.3-201ENST00000539655 198 ntBASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 AC004486.1-201ENST00000546846 233 ntBASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 DEFB122-202ENST00000569013 197 ntBASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 AC068831.7-201ENST00000616954 363 ntBASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 SNORA25.6-201ENST00000364121 118 ntBASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 U3.12-201ENST00000364498 214 ntBASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 RNU1-100P-201ENST00000365255 165 ntBASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 MIR34A-201ENST00000385130 110 ntBASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 MIR1303-201ENST00000408625 86 ntBASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 HMGB3P12-201ENST00000438745 556 ntBASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 HMGB1P15-201ENST00000453854 435 ntBASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 AP000705.1-201ENST00000454567 350 ntBASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 RPS27P27-201ENST00000498779 255 ntBASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 AC008885.2-201ENST00000509506 930 ntBASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 AC105914.1-201ENST00000511798 226 ntBASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 AP000916.1-201ENST00000533869 835 ntBASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 AP001029.3-201ENST00000588063 596 ntBASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 AC242628.1-201ENST00000606810 391 ntBASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.03□□□□□ -1.92
UPF3BQ9BZI7 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.93
UPF3BQ9BZI7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 RNU6-152P-201ENST00000384037 107 ntBASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 RAP1BP1-201ENST00000412709 553 ntBASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 AC109780.2-201ENST00000413467 845 ntBASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 AC080125.1-201ENST00000414888 684 ntBASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 MRPL50P2-201ENST00000416821 482 ntBASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 RAD1P2-201ENST00000446414 663 ntBASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 AP000936.2-201ENST00000447151 681 ntBASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 AC010285.1-201ENST00000470580 392 ntBASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 AC010301.1-201ENST00000473936 355 ntBASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 AC108157.1-201ENST00000510511 539 ntBASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 AC084033.1-201ENST00000550830 633 ntBASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 AC234778.2-201ENST00000566241 354 ntBASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 MIR3670-2-201ENST00000582974 65 ntBASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 MIR3670-1-201ENST00000584160 65 ntBASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 MIR3670-3-201ENST00000584855 65 ntBASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 MIR3670-4-201ENST00000612260 65 ntBASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 AP002907.1-201ENST00000606361 1430 ntBASIC3.02□□□□□ -1.93
UPF3BQ9BZI7 AP000526.1-201ENST00000603308 1388 ntBASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 RNA5SP68-201ENST00000363885 119 ntBASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 MIR142-201ENST00000384835 87 ntBASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 RPL21P32-201ENST00000419877 477 ntBASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 AC126182.1-201ENST00000478134 357 ntBASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 RPL21P131-201ENST00000497298 483 ntBASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 SNORA31.20-201ENST00000517111 133 ntBASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 HMGB1P41-201ENST00000520234 440 ntBASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 AC019227.1-201ENST00000526902 510 ntBASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 AL442163.2-201ENST00000553912 710 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms