Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC025031.4-201ENST00000621248 3271 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AL138713.1-201ENST00000624026 2130 ntBASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM54Q9BYV2 AL136964.1-201ENST00000622038 2990 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 RNVU1-6-201ENST00000364688 164 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 MIR129-1-201ENST00000384972 72 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 MTCO3P40-201ENST00000392516 676 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 SNORA11F-201ENST00000408237 128 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 TMSB10P2-201ENST00000416049 131 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 AL161631.1-201ENST00000417933 486 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 TIMM9P3-201ENST00000428659 274 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 AC133473.1-201ENST00000455173 299 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 DHFRP3-201ENST00000455595 559 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 RPL35AP15-201ENST00000468042 339 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 AC093278.1-201ENST00000494700 600 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 AC111000.3-201ENST00000508057 576 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 FTH1P21-201ENST00000512179 511 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 AC011352.1-201ENST00000512300 793 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 AP000857.1-201ENST00000532151 543 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 AL133271.1-201ENST00000538229 291 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 AC090616.5-202ENST00000582111 297 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 AC012669.1-201ENST00000603209 283 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 HMGN2P28-201ENST00000606102 262 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 AC090517.2-201ENST00000614966 680 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 uc_338.12-201ENST00000616344 181 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 AL157786.1-207ENST00000627771 695 ntBASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM54Q9BYV2 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 SNORD74.4-201ENST00000364129 80 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 RNU6-637P-201ENST00000384050 107 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 RNU6-432P-201ENST00000384196 109 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 MIR192-201ENST00000384915 110 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 RPL7P60-201ENST00000397636 735 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 AL583834.1-201ENST00000406943 343 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 Y_RNA.625-201ENST00000411256 107 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 RPL37P18-201ENST00000411602 243 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 RPL23AP1-201ENST00000428990 471 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 RPS6P12-201ENST00000432491 726 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 AC002486.1-201ENST00000435098 391 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 ABCF2P2-201ENST00000450549 296 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 S100A11P1-201ENST00000477525 312 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 SAP18P1-201ENST00000512058 390 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 RNA5SP337-201ENST00000517007 109 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 FAM92A1P1-201ENST00000528023 890 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 OR4T1P-201ENST00000554933 911 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 SNORD84-203ENST00000584275 78 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 RPL12P25-202ENST00000598100 674 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 AC008277.2-201ENST00000605196 797 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 AL109618.2-201ENST00000605527 211 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 AL590282.1-201ENST00000610379 1136 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 MIR6748-201ENST00000610433 71 ntBASIC4.25□□□□□ -1.73
TRIM54Q9BYV2 AC245517.5-201ENST00000611529 162 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms