Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.1□□□□□ -1.91
SCAPERQ9BY12 HSPE1P22-201ENST00000456856 327 ntBASIC3.1□□□□□ -1.91
SCAPERQ9BY12 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
SCAPERQ9BY12 AC078918.1-201ENST00000498515 228 ntBASIC3.1□□□□□ -1.91
SCAPERQ9BY12 MTCYBP37-201ENST00000510642 1133 ntBASIC3.1□□□□□ -1.91
SCAPERQ9BY12 HMGB1P1-201ENST00000522557 636 ntBASIC3.1□□□□□ -1.91
SCAPERQ9BY12 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.1□□□□□ -1.91
SCAPERQ9BY12 AC009570.1-201ENST00000609599 745 ntBASIC3.1□□□□□ -1.91
SCAPERQ9BY12 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.09□□□□□ -1.91
SCAPERQ9BY12 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SCAPERQ9BY12 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SCAPERQ9BY12 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
SCAPERQ9BY12 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SCAPERQ9BY12 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SCAPERQ9BY12 RNU6-457P-201ENST00000363999 107 ntBASIC3.09□□□□□ -1.92
SCAPERQ9BY12 U3.15-201ENST00000365398 212 ntBASIC3.09□□□□□ -1.92
SCAPERQ9BY12 RNA5SP167-201ENST00000365461 116 ntBASIC3.09□□□□□ -1.92
SCAPERQ9BY12 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.09□□□□□ -1.92
SCAPERQ9BY12 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.09□□□□□ -1.92
SCAPERQ9BY12 SETP2-201ENST00000553886 926 ntBASIC3.09□□□□□ -1.92
SCAPERQ9BY12 OR4K7P-201ENST00000580232 945 ntBASIC3.09□□□□□ -1.92
SCAPERQ9BY12 AC011468.4-201ENST00000603942 409 ntBASIC3.09□□□□□ -1.92
SCAPERQ9BY12 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.09□□□□□ -1.92
SCAPERQ9BY12 AC132825.8-201ENST00000640783 297 ntBASIC3.09□□□□□ -1.92
SCAPERQ9BY12 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.08□□□□□ -1.92
SCAPERQ9BY12 SNORA40.18-201ENST00000391200 128 ntBASIC3.08□□□□□ -1.92
SCAPERQ9BY12 RNA5SP181-201ENST00000410246 98 ntBASIC3.08□□□□□ -1.92
SCAPERQ9BY12 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SCAPERQ9BY12 AL353729.1-201ENST00000425044 720 ntBASIC3.08□□□□□ -1.92
SCAPERQ9BY12 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.08□□□□□ -1.92
SCAPERQ9BY12 AP004372.1-201ENST00000604842 844 ntBASIC3.08□□□□□ -1.92
SCAPERQ9BY12 AC120053.1-201ENST00000607706 736 ntBASIC3.08□□□□□ -1.92
SCAPERQ9BY12 AC013562.2-201ENST00000611632 603 ntBASIC3.08□□□□□ -1.92
SCAPERQ9BY12 RPL23AP61-201ENST00000623642 466 ntBASIC3.08□□□□□ -1.92
SCAPERQ9BY12 AC090617.7-201ENST00000623952 126 ntBASIC3.08□□□□□ -1.92
SCAPERQ9BY12 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SCAPERQ9BY12 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SCAPERQ9BY12 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SCAPERQ9BY12 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.07□□□□□ -1.92
SCAPERQ9BY12 EI24P1-201ENST00000416584 867 ntBASIC3.07□□□□□ -1.92
SCAPERQ9BY12 SSXP9-201ENST00000417503 292 ntBASIC3.07□□□□□ -1.92
SCAPERQ9BY12 AC005005.2-201ENST00000420779 380 ntBASIC3.07□□□□□ -1.92
SCAPERQ9BY12 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.07□□□□□ -1.92
SCAPERQ9BY12 AL138799.3-201ENST00000438968 350 ntBASIC3.07□□□□□ -1.92
SCAPERQ9BY12 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.07□□□□□ -1.92
SCAPERQ9BY12 SNORD13-201ENST00000459299 104 ntBASIC3.07□□□□□ -1.92
SCAPERQ9BY12 RNU2-58P-201ENST00000516403 183 ntBASIC3.07□□□□□ -1.92
SCAPERQ9BY12 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.07□□□□□ -1.92
SCAPERQ9BY12 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.07□□□□□ -1.92
SCAPERQ9BY12 AL049779.4-201ENST00000604500 156 ntBASIC3.07□□□□□ -1.92
SCAPERQ9BY12 MIR8070-201ENST00000616510 88 ntBASIC3.07□□□□□ -1.92
SCAPERQ9BY12 MFSD8-245ENST00000641743 948 ntBASIC3.07□□□□□ -1.92
SCAPERQ9BY12 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.06□□□□□ -1.92
SCAPERQ9BY12 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SCAPERQ9BY12 AC019129.1-201ENST00000403786 261 ntBASIC3.06□□□□□ -1.92
SCAPERQ9BY12 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SCAPERQ9BY12 AC048351.1-201ENST00000420064 602 ntBASIC3.06□□□□□ -1.92
SCAPERQ9BY12 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.06□□□□□ -1.92
SCAPERQ9BY12 TRIM60P18-201ENST00000441518 828 ntBASIC3.06□□□□□ -1.92
SCAPERQ9BY12 RNU7-157P-201ENST00000459600 66 ntBASIC3.06□□□□□ -1.92
SCAPERQ9BY12 AC087241.2-201ENST00000535801 324 ntBASIC3.06□□□□□ -1.92
SCAPERQ9BY12 AC011611.5-201ENST00000552477 578 ntBASIC3.06□□□□□ -1.92
SCAPERQ9BY12 AL163153.1-201ENST00000554223 283 ntBASIC3.06□□□□□ -1.92
SCAPERQ9BY12 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.06□□□□□ -1.92
SCAPERQ9BY12 RPAP2P1-201ENST00000603626 1168 ntBASIC3.06□□□□□ -1.92
SCAPERQ9BY12 OR1S1-201ENST00000624470 978 ntBASIC3.06□□□□□ -1.92
SCAPERQ9BY12 AC010329.2-201ENST00000595195 2737 ntBASIC3.06□□□□□ -1.92
SCAPERQ9BY12 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.05□□□□□ -1.92
SCAPERQ9BY12 RPL23AP63-201ENST00000498752 471 ntBASIC3.05□□□□□ -1.92
SCAPERQ9BY12 RNU6-56P-201ENST00000516986 93 ntBASIC3.05□□□□□ -1.92
SCAPERQ9BY12 snoZ278.1-201ENST00000517059 112 ntBASIC3.05□□□□□ -1.92
SCAPERQ9BY12 AC239860.2-201ENST00000525886 270 ntBASIC3.05□□□□□ -1.92
SCAPERQ9BY12 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.05□□□□□ -1.92
SCAPERQ9BY12 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.05□□□□□ -1.92
SCAPERQ9BY12 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.05□□□□□ -1.92
SCAPERQ9BY12 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SCAPERQ9BY12 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SCAPERQ9BY12 MIR378A-201ENST00000362177 66 ntBASIC3.04□□□□□ -1.92
SCAPERQ9BY12 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SCAPERQ9BY12 Y_RNA.508-201ENST00000384502 114 ntBASIC3.04□□□□□ -1.92
SCAPERQ9BY12 AC003989.2-201ENST00000440224 169 ntBASIC3.04□□□□□ -1.92
SCAPERQ9BY12 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.04□□□□□ -1.92
SCAPERQ9BY12 NAMPTP2-201ENST00000505629 1115 ntBASIC3.04□□□□□ -1.92
SCAPERQ9BY12 AC113368.1-201ENST00000603736 382 ntBASIC3.04□□□□□ -1.92
SCAPERQ9BY12 AC091834.1-201ENST00000614543 472 ntBASIC3.04□□□□□ -1.92
SCAPERQ9BY12 SNHG22-203ENST00000617833 660 ntBASIC3.04□□□□□ -1.92
SCAPERQ9BY12 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.04□□□□□ -1.92
SCAPERQ9BY12 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.04□□□□□ -1.92
SCAPERQ9BY12 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
SCAPERQ9BY12 FGF7P8-201ENST00000402994 292 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 AF274854.1-201ENST00000413236 615 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 SNORA31.11-201ENST00000516528 139 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 MIR3683-201ENST00000580847 82 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 AL670379.6-201ENST00000603753 252 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 AL670379.11-201ENST00000604059 253 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 AL670379.10-201ENST00000604330 253 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 AC008162.1-201ENST00000604718 254 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 AL670379.1-201ENST00000604752 252 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 AL670379.2-201ENST00000604983 252 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms