Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 AC096632.1-201ENST00000427395 310 ntBASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 AC011352.3-201ENST00000505162 593 ntBASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 AC114781.4-201ENST00000513707 639 ntBASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 AC093510.2-201ENST00000562820 896 ntBASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 AC107954.1-201ENST00000565906 727 ntBASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 AP002906.1-201ENST00000603405 233 ntBASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 AP005229.2-201ENST00000609980 697 ntBASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 AC131902.3-201ENST00000611767 581 ntBASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RPAP1Q9BWH6 SGO1P1-201ENST00000603525 1447 ntBASIC3.34□□□□□ -1.87
RPAP1Q9BWH6 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
RPAP1Q9BWH6 API5P2-201ENST00000397055 1498 ntBASIC3.34□□□□□ -1.87
RPAP1Q9BWH6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RPAP1Q9BWH6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RPAP1Q9BWH6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RPAP1Q9BWH6 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 AL672167.1-206ENST00000356293 943 ntBASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 RNA5SP295-201ENST00000362655 121 ntBASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 RNU6-354P-201ENST00000383862 107 ntBASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 U6.112-201ENST00000384129 70 ntBASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 RNU6-610P-201ENST00000384264 107 ntBASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 SNORA26.7-201ENST00000391288 122 ntBASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 AL138827.1-201ENST00000402666 306 ntBASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 SNORD88.1-201ENST00000408684 91 ntBASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 AC233981.1-201ENST00000423224 461 ntBASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 RNU7-140P-201ENST00000459546 60 ntBASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 SYPL1P1-201ENST00000473622 768 ntBASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 RN7SL499P-201ENST00000481141 276 ntBASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 RPL31P13-201ENST00000484151 370 ntBASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 AL136520.1-202ENST00000555494 763 ntBASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 AC074051.3-201ENST00000570238 358 ntBASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 AC013468.1-201ENST00000608680 598 ntBASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 AL121594.5-201ENST00000631724 573 ntBASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.34□□□□□ -1.88
RPAP1Q9BWH6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 AC092447.7-201ENST00000422212 1621 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 MIR16-1-201ENST00000385271 89 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 RNU2-52P-201ENST00000410680 190 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 RPL7P46-201ENST00000425129 740 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 ARL5AP4-201ENST00000430731 512 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 AL512637.2-201ENST00000431287 1256 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 MRPL50P4-201ENST00000446432 475 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 AL050341.1-201ENST00000447743 313 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 ARPC3P2-201ENST00000457786 533 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 HMGB1P38-201ENST00000490557 577 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 AC006445.2-201ENST00000510061 472 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 AL133271.1-201ENST00000538229 291 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 AL163153.1-201ENST00000554223 283 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 AL355836.1-201ENST00000555951 870 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 MTCO1P40-201ENST00000574371 625 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 MIR3605-201ENST00000583214 100 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 AL133393.1-201ENST00000603277 287 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 AC005046.1-201ENST00000608515 625 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 AC098679.5-201ENST00000624394 571 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 AC110774.1-201ENST00000623567 2018 ntBASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RPAP1Q9BWH6 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 RNU6-374P-201ENST00000364146 108 ntBASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 MT-TC-201ENST00000387405 66 ntBASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 SFR1P1-201ENST00000403720 688 ntBASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 AL138880.1-201ENST00000405824 642 ntBASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms