Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 SNRPFP1-201ENST00000414761 252 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AC092832.1-201ENST00000422934 400 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AC137499.1-201ENST00000427602 88 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 GPR143P-201ENST00000434155 205 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AC068587.1-201ENST00000483613 781 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 MTCO3P44-201ENST00000510977 541 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AC005798.1-201ENST00000513715 387 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AP001781.1-201ENST00000530977 207 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AC243972.3-201ENST00000539655 198 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 PDCD5P1-201ENST00000543528 309 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 MIR4715-201ENST00000584117 79 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AC006272.2-201ENST00000594725 163 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 VN1R80P-201ENST00000597126 338 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AL132765.2-201ENST00000610812 351 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AC083809.1-201ENST00000615051 472 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AC105074.1-201ENST00000623380 3095 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 MAPK10-303ENST00000641324 3959 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 MIR1-2-201ENST00000384961 85 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 MIR129-1-201ENST00000384972 72 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 U3.29-201ENST00000391296 212 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AL080315.1-201ENST00000406055 466 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AL354719.1-201ENST00000406535 843 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 RNU6-373P-201ENST00000411247 98 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AC127526.1-201ENST00000417526 366 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 CYCSP10-201ENST00000417973 294 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 RPL23AP1-201ENST00000428990 471 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 PSMA2P3-201ENST00000429685 675 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 CBWD4P-201ENST00000445695 655 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 Z95327.1-201ENST00000446082 482 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AL353691.1-201ENST00000451332 387 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 HMGB3P21-201ENST00000452483 547 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 RPS23P7-201ENST00000466210 444 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AC093278.1-201ENST00000494700 600 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 HMGN1P13-201ENST00000505795 138 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 PCBP2P3-201ENST00000509726 843 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AC007016.1-201ENST00000512110 244 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 SNORD116-26-201ENST00000516006 96 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 RNA5SP337-201ENST00000517007 109 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 PTP4A1P6-201ENST00000531034 478 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 OR5B19P-201ENST00000531766 928 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AC093027.1-201ENST00000546698 429 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 HMGB1P6-201ENST00000569046 646 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AL355812.1-201ENST00000603215 216 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 OR6R2P-201ENST00000609216 300 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AL590099.1-201ENST00000615276 138 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AC090574.1-201ENST00000623186 233 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AL159972.1-201ENST00000625150 448 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms