Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AF186190.1-201ENST00000517470 480 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 AC008694.2-201ENST00000517591 306 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 AL138976.2-201ENST00000563989 694 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 AC034268.2-201ENST00000571784 482 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 NRBF2P1-201ENST00000587407 859 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 AC233280.2-201ENST00000603917 1070 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 AL049634.3-201ENST00000604968 457 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 AC010149.2-201ENST00000637608 315 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 SMG1P4-204ENST00000523028 4131 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 AC006971.1-201ENST00000407916 4486 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 MARK2P15-201ENST00000432204 2186 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 AC009902.3-201ENST00000606235 2172 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 NEAT1-202ENST00000501122 22743 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 Y_RNA.46-201ENST00000362695 102 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 RNU6-989P-201ENST00000362756 107 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 RPS20P2-201ENST00000402520 389 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 RPL7P25-201ENST00000404151 721 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 RN7SKP235-201ENST00000410662 305 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 SPA17P1-201ENST00000416656 452 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 AL391219.1-201ENST00000422570 483 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 AL353777.1-201ENST00000425552 326 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 RPEP2-201ENST00000432149 701 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 MRPS18BP2-201ENST00000434310 759 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 AL451139.1-201ENST00000434718 346 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 DHFRP3-201ENST00000455595 559 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 HMGN1P10-201ENST00000474557 553 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 Y_RNA.719-201ENST00000517156 106 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 MIR3913-1-201ENST00000577744 102 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 AC121334.2-201ENST00000605387 271 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 AL590099.1-201ENST00000615276 138 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 AC006065.5-201ENST00000623427 349 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 AC074029.4-201ENST00000624796 1859 ntBASIC4.54□□□□□ -1.68
LRFN3Q9BTN0 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 AC063976.2-201ENST00000425667 3556 ntBASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 SNRPFP1-201ENST00000414761 252 ntBASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 AC127526.1-201ENST00000417526 366 ntBASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 PGBD4P3-201ENST00000440731 581 ntBASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 MTND6P13-201ENST00000443510 523 ntBASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 MTND3P22-201ENST00000510932 243 ntBASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 RNU6-358P-201ENST00000516564 75 ntBASIC4.53□□□□□ -1.68
LRFN3Q9BTN0 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms