Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
USB1Q9BQ65 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.79□□□□□ -1.48
USB1Q9BQ65 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
USB1Q9BQ65 AC006484.1-201ENST00000435086 1884 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.79□□□□□ -1.48
USB1Q9BQ65 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
USB1Q9BQ65 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USB1Q9BQ65 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USB1Q9BQ65 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USB1Q9BQ65 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 AL359976.1-201ENST00000418655 3528 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USB1Q9BQ65 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USB1Q9BQ65 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USB1Q9BQ65 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 RNU6-263P-201ENST00000363811 107 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 SNORA64.3-201ENST00000365647 134 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 RNU1-74P-201ENST00000384108 171 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 RNU6-959P-201ENST00000384671 107 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 RNU2-61P-201ENST00000411069 191 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 RNU6-1135P-201ENST00000411083 103 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 AC126120.1-201ENST00000431082 470 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 HSPD1P21-201ENST00000436541 245 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 AL163193.1-201ENST00000444895 788 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 HIGD1AP2-201ENST00000446367 280 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 YRDCP3-201ENST00000456507 480 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 RN7SL189P-201ENST00000468631 289 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 AC010683.1-201ENST00000473673 378 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 SCARNA5-201ENST00000516201 276 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 RNU6-612P-201ENST00000516909 102 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 AC103996.1-201ENST00000555468 102 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 AC011921.2-201ENST00000589465 152 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 AC011921.3-201ENST00000605540 361 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 AL136531.3-201ENST00000624378 3658 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 AC010325.3-201ENST00000641084 394 ntBASIC5.78□□□□□ -1.48
USB1Q9BQ65 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USB1Q9BQ65 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
USB1Q9BQ65 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USB1Q9BQ65 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USB1Q9BQ65 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.78□□□□□ -1.48
USB1Q9BQ65 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USB1Q9BQ65 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.48
USB1Q9BQ65 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USB1Q9BQ65 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USB1Q9BQ65 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USB1Q9BQ65 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USB1Q9BQ65 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
USB1Q9BQ65 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USB1Q9BQ65 LINC01613-201ENST00000561476 2780 ntBASIC5.77□□□□□ -1.49
USB1Q9BQ65 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 UBE2L2-201ENST00000254302 429 ntBASIC5.77□□□□□ -1.49
USB1Q9BQ65 MIR301A-201ENST00000385261 86 ntBASIC5.77□□□□□ -1.49
USB1Q9BQ65 MIR1250-201ENST00000408098 113 ntBASIC5.77□□□□□ -1.49
USB1Q9BQ65 RNU6-651P-201ENST00000411040 105 ntBASIC5.77□□□□□ -1.49
USB1Q9BQ65 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USB1Q9BQ65 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 RPL21P40-201ENST00000428586 483 ntBASIC5.77□□□□□ -1.49
USB1Q9BQ65 MTCO1P5-201ENST00000433573 344 ntBASIC5.77□□□□□ -1.49
USB1Q9BQ65 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 TIMM8BP2-201ENST00000445940 251 ntBASIC5.77□□□□□ -1.49
USB1Q9BQ65 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 AP001324.2-201ENST00000461163 319 ntBASIC5.77□□□□□ -1.49
USB1Q9BQ65 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 RPL23AP65-201ENST00000475608 468 ntBASIC5.77□□□□□ -1.49
USB1Q9BQ65 AL117692.1-201ENST00000494283 713 ntBASIC5.77□□□□□ -1.49
USB1Q9BQ65 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.77□□□□□ -1.49
USB1Q9BQ65 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms