Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.27□□□□□ -1.89
IFT140Q96RY7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
IFT140Q96RY7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.27□□□□□ -1.89
IFT140Q96RY7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.27□□□□□ -1.89
IFT140Q96RY7 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.27□□□□□ -1.89
IFT140Q96RY7 TRIM60P18-201ENST00000441518 828 ntBASIC3.27□□□□□ -1.89
IFT140Q96RY7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.27□□□□□ -1.89
IFT140Q96RY7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.27□□□□□ -1.89
IFT140Q96RY7 AC104564.1-201ENST00000493028 407 ntBASIC3.27□□□□□ -1.89
IFT140Q96RY7 AC011352.3-201ENST00000505162 593 ntBASIC3.27□□□□□ -1.89
IFT140Q96RY7 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.27□□□□□ -1.89
IFT140Q96RY7 AC010872.1-201ENST00000624225 675 ntBASIC3.27□□□□□ -1.89
IFT140Q96RY7 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.27□□□□□ -1.89
IFT140Q96RY7 MTND5P7-201ENST00000413558 1798 ntBASIC3.27□□□□□ -1.89
IFT140Q96RY7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.26□□□□□ -1.89
IFT140Q96RY7 MIR1276-201ENST00000408707 83 ntBASIC3.26□□□□□ -1.89
IFT140Q96RY7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.26□□□□□ -1.89
IFT140Q96RY7 SDR42E1P3-201ENST00000438345 502 ntBASIC3.26□□□□□ -1.89
IFT140Q96RY7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.26□□□□□ -1.89
IFT140Q96RY7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.26□□□□□ -1.89
IFT140Q96RY7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.26□□□□□ -1.89
IFT140Q96RY7 AL160237.3-201ENST00000604114 1013 ntBASIC3.26□□□□□ -1.89
IFT140Q96RY7 AC091488.1-201ENST00000604239 660 ntBASIC3.26□□□□□ -1.89
IFT140Q96RY7 HMGN2P28-201ENST00000606102 262 ntBASIC3.26□□□□□ -1.89
IFT140Q96RY7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
IFT140Q96RY7 AL355578.1-201ENST00000607405 1328 ntBASIC3.25□□□□□ -1.89
IFT140Q96RY7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
IFT140Q96RY7 AL590084.1-201ENST00000407885 387 ntBASIC3.25□□□□□ -1.89
IFT140Q96RY7 PTP4A1P1-201ENST00000420539 515 ntBASIC3.25□□□□□ -1.89
IFT140Q96RY7 NEK4P1-201ENST00000433383 879 ntBASIC3.25□□□□□ -1.89
IFT140Q96RY7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.25□□□□□ -1.89
IFT140Q96RY7 AP000852.1-201ENST00000472460 573 ntBASIC3.25□□□□□ -1.89
IFT140Q96RY7 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.25□□□□□ -1.89
IFT140Q96RY7 AC068781.1-201ENST00000488231 618 ntBASIC3.25□□□□□ -1.89
IFT140Q96RY7 RPS29P11-201ENST00000496507 171 ntBASIC3.25□□□□□ -1.89
IFT140Q96RY7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.25□□□□□ -1.89
IFT140Q96RY7 SNORA25.15-201ENST00000516487 89 ntBASIC3.25□□□□□ -1.89
IFT140Q96RY7 RNU6-250P-201ENST00000516958 103 ntBASIC3.25□□□□□ -1.89
IFT140Q96RY7 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.25□□□□□ -1.89
IFT140Q96RY7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.25□□□□□ -1.89
IFT140Q96RY7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.25□□□□□ -1.89
IFT140Q96RY7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.25□□□□□ -1.89
IFT140Q96RY7 CD24P2-201ENST00000565486 219 ntBASIC3.25□□□□□ -1.89
IFT140Q96RY7 ISCA1P3-201ENST00000577104 373 ntBASIC3.25□□□□□ -1.89
IFT140Q96RY7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
IFT140Q96RY7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.24□□□□□ -1.89
IFT140Q96RY7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.24□□□□□ -1.89
IFT140Q96RY7 AC027514.1-201ENST00000588561 1603 ntBASIC3.24□□□□□ -1.89
IFT140Q96RY7 U8.9-201ENST00000365667 134 ntBASIC3.24□□□□□ -1.89
IFT140Q96RY7 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.24□□□□□ -1.89
IFT140Q96RY7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.24□□□□□ -1.89
IFT140Q96RY7 RPS7P5-201ENST00000441482 581 ntBASIC3.24□□□□□ -1.89
IFT140Q96RY7 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.24□□□□□ -1.89
IFT140Q96RY7 AC007182.2-201ENST00000489251 402 ntBASIC3.24□□□□□ -1.89
IFT140Q96RY7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.24□□□□□ -1.89
IFT140Q96RY7 MIR5002-201ENST00000584713 97 ntBASIC3.24□□□□□ -1.89
IFT140Q96RY7 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.24□□□□□ -1.89
IFT140Q96RY7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.24□□□□□ -1.89
IFT140Q96RY7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.24□□□□□ -1.89
IFT140Q96RY7 AC073348.1-201ENST00000623002 331 ntBASIC3.24□□□□□ -1.89
IFT140Q96RY7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
IFT140Q96RY7 AF127577.6-201ENST00000623352 2191 ntBASIC3.24□□□□□ -1.89
IFT140Q96RY7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
IFT140Q96RY7 RLIMP2-201ENST00000427891 1563 ntBASIC3.23□□□□□ -1.89
IFT140Q96RY7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.23□□□□□ -1.89
IFT140Q96RY7 ATG10-AS1-201ENST00000504846 648 ntBASIC3.23□□□□□ -1.89
IFT140Q96RY7 AC004943.3-201ENST00000624116 600 ntBASIC3.23□□□□□ -1.89
IFT140Q96RY7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.23□□□□□ -1.89
IFT140Q96RY7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
IFT140Q96RY7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.22□□□□□ -1.89
IFT140Q96RY7 RPL23AP58-201ENST00000440453 469 ntBASIC3.22□□□□□ -1.89
IFT140Q96RY7 MOB1AP2-201ENST00000446060 614 ntBASIC3.22□□□□□ -1.89
IFT140Q96RY7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.22□□□□□ -1.89
IFT140Q96RY7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.22□□□□□ -1.89
IFT140Q96RY7 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.22□□□□□ -1.89
IFT140Q96RY7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.22□□□□□ -1.89
IFT140Q96RY7 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.22□□□□□ -1.89
IFT140Q96RY7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
IFT140Q96RY7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.22□□□□□ -1.89
IFT140Q96RY7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.22□□□□□ -1.89
IFT140Q96RY7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
IFT140Q96RY7 SET-203ENST00000372688 801 ntTSL 2 BASIC3.22□□□□□ -1.89
IFT140Q96RY7 DPPA2P1-201ENST00000428060 556 ntBASIC3.22□□□□□ -1.89
IFT140Q96RY7 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.22□□□□□ -1.89
IFT140Q96RY7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.22□□□□□ -1.89
IFT140Q96RY7 RNU7-95P-201ENST00000459222 64 ntBASIC3.22□□□□□ -1.89
IFT140Q96RY7 AC117532.1-201ENST00000514638 323 ntBASIC3.22□□□□□ -1.89
IFT140Q96RY7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.22□□□□□ -1.89
IFT140Q96RY7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.22□□□□□ -1.89
IFT140Q96RY7 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.22□□□□□ -1.89
IFT140Q96RY7 KPNA2P1-201ENST00000458289 1591 ntBASIC3.21□□□□□ -1.9
IFT140Q96RY7 Y_RNA.224-201ENST00000364308 111 ntBASIC3.21□□□□□ -1.9
IFT140Q96RY7 RNU6-392P-201ENST00000364926 101 ntBASIC3.21□□□□□ -1.9
IFT140Q96RY7 DEFA7P-201ENST00000382676 285 ntBASIC3.21□□□□□ -1.9
IFT140Q96RY7 HMGB1P13-201ENST00000406019 642 ntBASIC3.21□□□□□ -1.9
IFT140Q96RY7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.21□□□□□ -1.9
IFT140Q96RY7 DNAJC19P4-201ENST00000440115 345 ntBASIC3.21□□□□□ -1.9
IFT140Q96RY7 USP9YP8-201ENST00000441913 500 ntBASIC3.21□□□□□ -1.9
IFT140Q96RY7 AL445669.2-201ENST00000454425 421 ntBASIC3.21□□□□□ -1.9
IFT140Q96RY7 RPS29P12-201ENST00000460178 152 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms