Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DUX3Q96PT4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DUX3Q96PT4 RNA5SP315-201ENST00000516340 116 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 RNA5SP312-201ENST00000517068 116 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 ARL2BPP5-201ENST00000523141 481 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DUX3Q96PT4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 AC008127.2-201ENST00000549925 1075 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 MIR4504-201ENST00000577413 92 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 MIR3160-1-201ENST00000577972 85 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 VN1R85P-201ENST00000601587 426 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 AC012531.5-201ENST00000611375 151 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 AL161637.1-201ENST00000622380 412 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 AC091905.1-201ENST00000624400 311 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 AL008636.1-201ENST00000625038 1018 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DUX3Q96PT4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
DUX3Q96PT4 AC073544.1-201ENST00000600110 1595 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DUX3Q96PT4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 MIR372-201ENST00000362225 67 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 RNU1-14P-201ENST00000362759 152 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 RNU1-20P-201ENST00000363314 162 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 SNORD6-201ENST00000365444 73 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 RNA5SP167-201ENST00000365461 116 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DUX3Q96PT4 MIR181A1-201ENST00000385026 110 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 SNORA11-201ENST00000408789 128 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 RNU4-55P-201ENST00000410731 137 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 MIR1911-201ENST00000410783 80 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 AC078974.1-201ENST00000411597 223 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 GLRXP1-201ENST00000423261 334 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 DPPA3P1-201ENST00000448050 469 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 PSPHP1-201ENST00000450062 261 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 CEACAMP4-201ENST00000457676 421 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 RN7SL691P-201ENST00000494487 301 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 AC106872.3-201ENST00000495104 446 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 HMGB1P21-201ENST00000502313 581 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 KCTD9P2-201ENST00000512203 1013 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 AC010342.1-201ENST00000514047 877 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 MIR2116-201ENST00000517221 80 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 AC123904.2-201ENST00000548059 300 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 ADI1P3-201ENST00000549509 470 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 ZNF519P2-201ENST00000557032 169 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 SNORA59B-202ENST00000578183 701 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 BBIP1P1-201ENST00000602999 279 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 AC055876.5-201ENST00000605667 259 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 AC007546.1-201ENST00000619452 559 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 AC138649.5-201ENST00000637456 137 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 AC099654.14-201ENST00000638599 341 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 AC125257.1-201ENST00000560400 2930 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
DUX3Q96PT4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.3□□□□□ -1.88
DUX3Q96PT4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
DUX3Q96PT4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
DUX3Q96PT4 IQCB2P-201ENST00000401788 1633 ntBASIC3.3□□□□□ -1.88
DUX3Q96PT4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
DUX3Q96PT4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
DUX3Q96PT4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
DUX3Q96PT4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms