Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AC018816.2-201ENST00000621460 353 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 MIR1322-201ENST00000638013 71 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 LINC02211-204ENST00000642024 1070 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 SGO1P2-201ENST00000429458 1589 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 AC109315.1-201ENST00000584143 1347 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AL136164.4-201ENST00000625013 2135 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AC118273.1-201ENST00000525324 3006 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 OR5H2-201ENST00000355273 945 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
ZNF560Q96MR9 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AP002088.1-201ENST00000382740 395 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 OFD1P3Y-201ENST00000453312 783 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AC006539.3-201ENST00000454258 129 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF560Q96MR9 HMGN1P18-201ENST00000457642 277 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 snoU109.3-201ENST00000459477 145 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 RN7SL504P-201ENST00000494496 287 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AC090453.1-201ENST00000495560 436 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF560Q96MR9 PRELID3BP6-201ENST00000503839 571 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 MLLT10P2-201ENST00000506434 249 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.44□□□□□ -1.86
ZNF560Q96MR9 RN7SKP57-201ENST00000517248 293 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF560Q96MR9 NDUFB9P3-201ENST00000521269 501 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF560Q96MR9 SNRPGP16-201ENST00000533275 226 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AC037471.2-201ENST00000564941 598 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.44□□□□□ -1.86
ZNF560Q96MR9 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.44□□□□□ -1.86
ZNF560Q96MR9 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AC021749.1-201ENST00000604322 607 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AL110115.1-201ENST00000614396 364 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 MIR8057-201ENST00000620957 69 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AL353748.2-201ENST00000622148 471 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AC004009.2-201ENST00000623016 728 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 AL356585.4-201ENST00000623078 1229 ntBASIC3.44□□□□□ -1.86
ZNF560Q96MR9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ZNF560Q96MR9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.43□□□□□ -1.86
ZNF560Q96MR9 SNORD116-12-201ENST00000384468 92 ntBASIC3.43□□□□□ -1.86
ZNF560Q96MR9 MIR122-201ENST00000385044 85 ntBASIC3.43□□□□□ -1.86
ZNF560Q96MR9 MTND2P5-201ENST00000432656 1006 ntBASIC3.43□□□□□ -1.86
ZNF560Q96MR9 HMGN2P20-201ENST00000437531 273 ntBASIC3.43□□□□□ -1.86
ZNF560Q96MR9 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 AP002884.2-201ENST00000471647 395 ntBASIC3.43□□□□□ -1.86
ZNF560Q96MR9 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 ST13P14-201ENST00000474095 734 ntBASIC3.43□□□□□ -1.86
ZNF560Q96MR9 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 COX7A2P2-201ENST00000505291 250 ntBASIC3.43□□□□□ -1.86
ZNF560Q96MR9 HMGB1P28-201ENST00000507778 552 ntBASIC3.43□□□□□ -1.86
ZNF560Q96MR9 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 SLC2A13P1-201ENST00000531560 322 ntBASIC3.43□□□□□ -1.86
ZNF560Q96MR9 AC005832.3-201ENST00000537929 631 ntBASIC3.43□□□□□ -1.86
ZNF560Q96MR9 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.43□□□□□ -1.86
ZNF560Q96MR9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 BDH2P1-201ENST00000602288 736 ntBASIC3.43□□□□□ -1.86
ZNF560Q96MR9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 AL445984.1-201ENST00000637834 659 ntBASIC3.43□□□□□ -1.86
ZNF560Q96MR9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF560Q96MR9 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZNF560Q96MR9 AC097714.1-201ENST00000511272 1647 ntBASIC3.42□□□□□ -1.86
ZNF560Q96MR9 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
ZNF560Q96MR9 OR1S2-201ENST00000302592 978 ntBASIC3.42□□□□□ -1.86
ZNF560Q96MR9 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZNF560Q96MR9 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.42□□□□□ -1.86
ZNF560Q96MR9 MTCO1P39-201ENST00000426148 480 ntBASIC3.42□□□□□ -1.86
ZNF560Q96MR9 AC079780.1-201ENST00000428259 207 ntBASIC3.42□□□□□ -1.86
ZNF560Q96MR9 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.42□□□□□ -1.86
ZNF560Q96MR9 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.42□□□□□ -1.86
ZNF560Q96MR9 TRGVB-201ENST00000453257 471 ntBASIC3.42□□□□□ -1.86
ZNF560Q96MR9 Z82190.1-201ENST00000454534 490 ntBASIC3.42□□□□□ -1.86
ZNF560Q96MR9 AC010401.1-201ENST00000463867 348 ntBASIC3.42□□□□□ -1.86
ZNF560Q96MR9 RPS3AP43-201ENST00000479743 781 ntBASIC3.42□□□□□ -1.86
ZNF560Q96MR9 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms