Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC040904.1-201ENST00000590850 223 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 CKS1BP3-201ENST00000600888 237 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 KC877982.1-201ENST00000602313 470 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 BX664608.1-201ENST00000610519 487 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 AP001506.1-201ENST00000615444 211 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 MIR7641-1-201ENST00000627518 61 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 AC010733.2-201ENST00000589496 5702 ntBASIC4.23□□□□□ -1.73
CCDC138Q96M89 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
CCDC138Q96M89 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC138Q96M89 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC138Q96M89 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC138Q96M89 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 Y_RNA.194-201ENST00000363985 102 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC138Q96M89 RNU6-76P-201ENST00000384060 104 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 AL583835.1-201ENST00000399570 407 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 HSPE1P26-201ENST00000405341 275 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 ELOCP19-201ENST00000411919 318 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 AMD1P2-201ENST00000412936 992 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 CDK8P2-201ENST00000415020 547 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 CRYBB2P1-203ENST00000415709 538 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 AC006366.1-201ENST00000422002 759 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 RPL23AP38-201ENST00000423801 469 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 CBX1P1-201ENST00000440184 427 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 MTND6P13-201ENST00000443510 523 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 RPL5P32-201ENST00000454085 879 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 OR9M1P-201ENST00000459641 921 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 AC020893.1-201ENST00000502452 580 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 MTCO2P32-201ENST00000514865 403 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 AP003122.4-201ENST00000530980 758 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 MIR4277-201ENST00000578298 84 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 MIR3682-201ENST00000581338 84 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 MIR5096-201ENST00000583713 70 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 HMGN1P30-201ENST00000589286 268 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 AC004067.1-201ENST00000608733 700 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 AL391813.2-201ENST00000609113 322 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 AL603758.1-201ENST00000618654 241 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 AC092656.1-203ENST00000624134 423 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 AC048347.1-201ENST00000624621 427 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 AC092326.2-201ENST00000624772 1561 ntBASIC4.22□□□□□ -1.73
CCDC138Q96M89 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC138Q96M89 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CCDC138Q96M89 Z82217.1-201ENST00000625157 8149 ntBASIC4.21□□□□□ -1.73
CCDC138Q96M89 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
CCDC138Q96M89 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC138Q96M89 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC138Q96M89 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.21□□□□□ -1.73
CCDC138Q96M89 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
CCDC138Q96M89 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC138Q96M89 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC138Q96M89 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 AC007685.1-201ENST00000329806 452 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 RNU6-623P-201ENST00000363143 105 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 SNORA75-201ENST00000384158 137 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 RNU6-297P-201ENST00000384636 107 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 MIR141-201ENST00000384975 95 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 SNORD66.1-201ENST00000391230 76 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 MIR1183-201ENST00000408856 89 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 FAR2P2-201ENST00000413041 594 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 TIMM9P1-201ENST00000436122 256 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 RPL26P6-201ENST00000440913 438 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 AL512326.1-201ENST00000443050 721 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 FABP3P2-201ENST00000453169 399 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 AC108860.1-201ENST00000484521 383 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 RPS15AP36-201ENST00000492022 382 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 AC104164.2-201ENST00000496953 495 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 MTCO3P7-201ENST00000510008 774 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC138Q96M89 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 MIR2114-201ENST00000516645 80 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 RN7SKP289-201ENST00000517244 295 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 RAB9BP1-201ENST00000519581 626 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms