Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 RNU6-744P-201ENST00000365557 107 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX27Q96L92 RNU6-1316P-201ENST00000384242 108 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 AL031121.1-201ENST00000406553 254 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 RNU4-6P-201ENST00000410804 122 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 RPS12P23-201ENST00000419579 400 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 AC006366.1-201ENST00000422002 759 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX27Q96L92 OR5BE1P-201ENST00000425977 939 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 DLGAP5P1-201ENST00000430307 464 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.41□□□□□ -1.7
SNX27Q96L92 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.41□□□□□ -1.7
SNX27Q96L92 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX27Q96L92 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX27Q96L92 RPL32P28-201ENST00000443577 397 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 RPL7P52-201ENST00000449200 742 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX27Q96L92 RN7SL807P-201ENST00000470923 297 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 S100A11P1-201ENST00000477525 312 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX27Q96L92 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX27Q96L92 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX27Q96L92 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.41□□□□□ -1.7
SNX27Q96L92 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX27Q96L92 MTCO3P7-201ENST00000510008 774 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX27Q96L92 RNU7-143P-201ENST00000516781 65 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 RN7SKP116-201ENST00000516902 319 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX27Q96L92 DEFB109D-201ENST00000529497 240 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.41□□□□□ -1.7
SNX27Q96L92 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX27Q96L92 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX27Q96L92 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.41□□□□□ -1.7
SNX27Q96L92 AC007424.1-203ENST00000554613 687 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.41□□□□□ -1.7
SNX27Q96L92 RPL23AP87-202ENST00000573039 466 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.41□□□□□ -1.7
SNX27Q96L92 MIR4307-201ENST00000582802 84 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 BCRP9-201ENST00000605312 388 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 AC087752.4-201ENST00000605911 462 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 MIR6868-201ENST00000611215 58 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 AC006329.2-201ENST00000611491 394 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 AC135507.2-201ENST00000612443 309 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX27Q96L92 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX27Q96L92 OR5BE1P-202ENST00000641168 1176 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX27Q96L92 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX27Q96L92 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.41□□□□□ -1.7
SNX27Q96L92 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX27Q96L92 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX27Q96L92 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.7
SNX27Q96L92 RNU6-769P-201ENST00000384407 104 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 SNORD116-4-201ENST00000384733 96 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX27Q96L92 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SNX27Q96L92 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.4□□□□□ -1.71
SNX27Q96L92 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.4□□□□□ -1.71
SNX27Q96L92 RSU1P2-202ENST00000437884 485 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 GDI2P2-201ENST00000445131 608 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 AP000542.1-201ENST00000448473 371 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 DNAJC19P1-201ENST00000455312 319 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 BTF3P5-201ENST00000457252 467 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 RPS4XP10-201ENST00000465034 731 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 AC146507.1-201ENST00000468335 354 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 AP001025.2-201ENST00000490908 477 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 AC110792.1-201ENST00000491826 472 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX27Q96L92 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.4□□□□□ -1.71
SNX27Q96L92 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX27Q96L92 TXNP6-201ENST00000510190 310 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 TMEM248P1-201ENST00000510579 951 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 PPBPP1-201ENST00000510807 373 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 PTGES3P3-201ENST00000511479 482 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 AC022447.1-201ENST00000515358 464 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 RNU6-27P-201ENST00000516146 107 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 MTND4LP18-201ENST00000526864 291 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.4□□□□□ -1.71
SNX27Q96L92 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.4□□□□□ -1.71
SNX27Q96L92 OR6C73P-201ENST00000546432 358 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.4□□□□□ -1.71
SNX27Q96L92 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.4□□□□□ -1.71
SNX27Q96L92 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX27Q96L92 AC090615.1-201ENST00000577519 154 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 MIR3611-201ENST00000584484 83 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 AL353997.4-201ENST00000586196 166 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 AC012557.2-201ENST00000605919 418 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 MIR432-201ENST00000606207 94 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 U73479.1-201ENST00000618062 168 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX27Q96L92 AC040168.1-201ENST00000623594 991 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 AC092656.1-203ENST00000624134 423 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 AC091925.2-201ENST00000625059 256 ntBASIC4.4□□□□□ -1.71
SNX27Q96L92 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.4□□□□□ -1.71
SNX27Q96L92 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms