Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CHFRQ96EP1 U8.3-201ENST00000363321 132 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 RNU6-196P-201ENST00000384315 107 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 AL356057.3-201ENST00000402607 340 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 AC114814.2-201ENST00000419195 485 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 FTH1P6-201ENST00000430768 320 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 AL590365.1-201ENST00000450788 243 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 AC012671.1-201ENST00000451912 203 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 AC007182.2-201ENST00000489251 402 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 KCTD9P2-201ENST00000512203 1013 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 AC010493.1-201ENST00000513479 292 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 AC112206.3-201ENST00000514578 389 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 MIR2116-201ENST00000517221 80 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 IGJP1-201ENST00000522682 475 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 AC110588.1-201ENST00000559699 137 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CHFRQ96EP1 RN7SL600P-201ENST00000581811 299 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 AL669831.4-202ENST00000590817 238 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 AC012507.3-201ENST00000603556 477 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 AC103710.4-201ENST00000609301 899 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CHFRQ96EP1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 AC092650.2-201ENST00000619984 902 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHFRQ96EP1 AP001350.1-201ENST00000601906 1524 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 AP002907.1-201ENST00000606361 1430 ntBASIC4.55□□□□□ -1.68
CHFRQ96EP1 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CHFRQ96EP1 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.54□□□□□ -1.68
CHFRQ96EP1 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHFRQ96EP1 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CHFRQ96EP1 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHFRQ96EP1 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 AL158163.1-201ENST00000603915 1649 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHFRQ96EP1 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.54□□□□□ -1.68
CHFRQ96EP1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CHFRQ96EP1 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHFRQ96EP1 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CHFRQ96EP1 MIR372-201ENST00000362225 67 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 MIR383-201ENST00000362257 73 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 Y_RNA.202-201ENST00000364083 110 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 RNY4P34-201ENST00000364779 95 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.54□□□□□ -1.68
CHFRQ96EP1 MIR568-201ENST00000385036 95 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 U8.14-201ENST00000390843 143 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 Y_RNA.579-201ENST00000390939 94 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 AL022722.2-201ENST00000402519 180 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 RN7SKP32-201ENST00000410167 303 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 RNU6-77P-201ENST00000410554 91 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 RNU2-62P-201ENST00000410868 191 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.54□□□□□ -1.68
CHFRQ96EP1 PIGFP2-201ENST00000421400 651 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 RPL23AP38-201ENST00000423801 469 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 AL445669.1-201ENST00000426743 755 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 RPS6P12-201ENST00000432491 726 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 AL353093.1-201ENST00000441292 436 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 RPL23AP20-201ENST00000447965 421 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 DNAJC19P8-201ENST00000452887 259 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 NDUFA5P7-201ENST00000452914 242 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 Y_RNA.639-201ENST00000458981 102 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 AP000926.1-201ENST00000479573 241 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.54□□□□□ -1.68
CHFRQ96EP1 Y_RNA.711-201ENST00000516993 102 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.54□□□□□ -1.68
CHFRQ96EP1 RPL21P5-201ENST00000554662 472 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 AC100830.2-201ENST00000581636 240 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 7SK.7-201ENST00000603504 247 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 AC245014.2-201ENST00000603689 287 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 AC246785.4-201ENST00000605374 287 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 uc_338.13-201ENST00000618243 179 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 AC009268.2-201ENST00000621925 457 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHFRQ96EP1 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CHFRQ96EP1 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CHFRQ96EP1 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.54□□□□□ -1.68
CHFRQ96EP1 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CHFRQ96EP1 MAPK10-286ENST00000641208 8747 ntBASIC4.54□□□□□ -1.68
CHFRQ96EP1 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CHFRQ96EP1 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms