Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RAC1P7-201ENST00000445367 377 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 NFU1P2-201ENST00000448700 469 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 AL162388.1-201ENST00000450912 352 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 RPL23AP81-201ENST00000455252 467 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 AC108059.3-201ENST00000456388 214 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 RPL21P103-201ENST00000479921 488 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 AC026979.1-201ENST00000492525 396 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 RN7SL691P-201ENST00000494487 301 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 AC104164.2-201ENST00000496953 495 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 Y_RNA.693-201ENST00000516641 110 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 AC109635.3-201ENST00000529536 185 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 AC006064.5-201ENST00000541782 248 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 AL357078.3-201ENST00000607528 618 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 FAM91A3P-201ENST00000456826 2544 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AC074029.4-201ENST00000624796 1859 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AL583835.1-201ENST00000399570 407 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 RNA5SP56-201ENST00000410277 118 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 MTCO1P20-201ENST00000425366 358 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 MTCO2P19-201ENST00000427513 598 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 TIMM9P1-201ENST00000436122 256 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 RPL23AP33-201ENST00000442301 452 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AL590399.6-201ENST00000446396 307 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 UBDP1-202ENST00000457888 382 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AC079804.1-201ENST00000461922 436 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AL592156.1-201ENST00000508758 304 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 OR4R3P-201ENST00000525084 838 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 COX6CP3-201ENST00000580869 223 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AL669831.4-202ENST00000590817 238 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AC068790.5-201ENST00000602741 355 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AL391646.1-201ENST00000603860 190 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AC004908.2-201ENST00000609090 574 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AL161637.1-201ENST00000622380 412 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 MIR1321-201ENST00000637766 79 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 AC099654.14-201ENST00000638599 341 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 SCN1A-220ENST00000641603 12506 ntBASIC4.01□□□□□ -1.77
CTHRC1Q96CG8 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CTHRC1Q96CG8 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4□□□□□ -1.77
CTHRC1Q96CG8 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CTHRC1Q96CG8 RPL32P3-201ENST00000359025 275 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 RNU6-1097P-201ENST00000363586 107 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 RNU4-1-201ENST00000363925 141 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 RNU6-1078P-201ENST00000364522 103 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 RNU5E-4P-201ENST00000364931 120 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 RNU6-356P-201ENST00000384140 107 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 RPL7P60-201ENST00000397636 735 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 AL603766.1-201ENST00000407763 664 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 RNA5SP146-201ENST00000410743 123 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 USP9YP6-201ENST00000413550 854 ntBASIC4□□□□□ -1.77
CTHRC1Q96CG8 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms