Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-CQ95604 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-CQ95604 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-CQ95604 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HLA-CQ95604 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.1□□□□□ -1.43
HLA-CQ95604 RN7SKP95-201ENST00000362860 303 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 Y_RNA.277-201ENST00000364754 102 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 RNA5SP131-201ENST00000365452 119 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 RNU1-77P-201ENST00000390868 162 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 AL080315.1-201ENST00000406055 466 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 HSPE1P8-201ENST00000406997 288 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 U3.42-201ENST00000408746 214 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-CQ95604 PRDX3P3-201ENST00000447765 522 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 AC087190.1-201ENST00000484462 480 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 AC107032.1-201ENST00000485945 480 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 MTND3P25-201ENST00000509243 135 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC6.1□□□□□ -1.43
HLA-CQ95604 AC021678.3-201ENST00000517893 476 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC6.1□□□□□ -1.43
HLA-CQ95604 AP002392.1-201ENST00000537692 208 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.1□□□□□ -1.43
HLA-CQ95604 OR4H12P-201ENST00000556269 907 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 AMZ2P1-203ENST00000565833 850 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.1□□□□□ -1.43
HLA-CQ95604 RN7SL652P-201ENST00000577769 300 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 MIR4330-201ENST00000579077 105 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-CQ95604 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC6.1□□□□□ -1.43
HLA-CQ95604 MZT1P2-201ENST00000604387 248 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 AC024255.1-201ENST00000614376 102 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 MIR376A1-201ENST00000616574 68 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 AP002799.1-201ENST00000623552 423 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 AC132068.1-201ENST00000623805 459 ntBASIC6.1□□□□□ -1.43
HLA-CQ95604 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-CQ95604 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-CQ95604 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
HLA-CQ95604 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.1□□□□□ -1.43
HLA-CQ95604 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-CQ95604 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-CQ95604 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-CQ95604 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-CQ95604 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-CQ95604 AL022323.4-201ENST00000623980 13120 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-CQ95604 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-CQ95604 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-CQ95604 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-CQ95604 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-CQ95604 RNY1P5-201ENST00000383890 115 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 Y_RNA.439-201ENST00000384119 94 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 MIR1250-201ENST00000408098 113 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 RNU2-50P-201ENST00000410494 143 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 AL451074.5-201ENST00000415894 435 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6.09□□□□□ -1.43
HLA-CQ95604 AL354766.1-201ENST00000423396 542 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 AC099677.3-201ENST00000427081 395 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 RPL23AP25-201ENST00000430973 463 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 AL159987.2-201ENST00000432754 307 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 OR4C10P-201ENST00000434991 931 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-CQ95604 RN7SL189P-201ENST00000468631 289 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 AC010683.1-201ENST00000473673 378 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 AC092824.1-201ENST00000483524 576 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 MRPS33P2-201ENST00000507850 322 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC6.09□□□□□ -1.43
HLA-CQ95604 SNORA70.11-201ENST00000515987 138 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 SNORA70.13-201ENST00000516116 138 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-CQ95604 SNRPGP16-201ENST00000533275 226 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-CQ95604 MRPS21P7-201ENST00000566937 238 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 AC119403.2-201ENST00000590960 598 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 MIR378J-201ENST00000611988 109 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 RMST_4.1-201ENST00000616886 107 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-CQ95604 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-CQ95604 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-CQ95604 AP005435.3-201ENST00000531260 3198 ntBASIC6.09□□□□□ -1.43
HLA-CQ95604 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
HLA-CQ95604 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-CQ95604 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.44
HLA-CQ95604 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HLA-CQ95604 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
HLA-CQ95604 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-CQ95604 MTND5P9-201ENST00000503854 1755 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
HLA-CQ95604 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-CQ95604 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-CQ95604 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-CQ95604 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-CQ95604 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-CQ95604 MIR411-201ENST00000362239 96 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 RNU6-288P-201ENST00000363690 104 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 Y_RNA.199-201ENST00000364014 102 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 Y_RNA.324-201ENST00000365165 102 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 MIR215-201ENST00000384858 110 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-CQ95604 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms