Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 PABPC1P7-201ENST00000413177 1513 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 RNU6-989P-201ENST00000362756 107 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 SNORA63.7-201ENST00000365579 123 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 SNORA70.6-201ENST00000383934 134 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 RNU6-95P-201ENST00000384697 107 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 MIR130A-201ENST00000385274 89 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 AC096921.1-201ENST00000411661 375 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 Z99755.1-201ENST00000414048 380 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 AC080125.1-201ENST00000414888 684 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 BMS1P17-202ENST00000416720 316 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 DPH3P2-201ENST00000422618 250 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 USMG5P1-201ENST00000425964 177 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 AL161722.2-201ENST00000434731 981 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 AC010655.3-201ENST00000478818 450 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 AC092451.1-201ENST00000480211 153 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 IGLV2-28-201ENST00000520681 304 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 AC137627.1-201ENST00000545761 289 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 AC090022.1-201ENST00000546569 311 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 AC026371.1-201ENST00000551867 419 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 AL359547.2-201ENST00000615810 418 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 OR4F13P-202ENST00000560066 2054 ntBASIC5.7□□□□□ -1.5
SCG3Q8WXD2 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.7□□□□□ -1.5
SCG3Q8WXD2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 AC093591.2-201ENST00000565254 3843 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 SNORD62.1-201ENST00000362541 86 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 RN7SKP160-201ENST00000363804 340 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 CYB5AP4-201ENST00000396692 399 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 CYCSP10-201ENST00000417973 294 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 AL662874.1-201ENST00000426065 230 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 AC008065.1-201ENST00000428525 348 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 TMEM183AP1-205ENST00000432739 290 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 GAPDHP48-201ENST00000436626 961 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 EEF1B2P6-201ENST00000445713 673 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 RN7SL177P-201ENST00000476596 299 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 RN7SL629P-201ENST00000489622 285 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 PGAM1P13-201ENST00000507497 754 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 BX510359.5-201ENST00000515651 304 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 RNU6-307P-201ENST00000516743 106 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 AC087854.1-201ENST00000519706 414 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 MIR3176-201ENST00000582210 90 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 AL034351.1-201ENST00000605288 668 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 AC100812.1-201ENST00000607622 580 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 AL121612.2-201ENST00000612261 482 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 AL596275.2-204ENST00000641628 552 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 AL596275.2-206ENST00000641957 626 ntBASIC5.69□□□□□ -1.5
SCG3Q8WXD2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SCG3Q8WXD2 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms