Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 RNU6-1016P-201ENST00000516689 94 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 RNA5SP503-201ENST00000517047 117 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 AC068587.5-201ENST00000528506 175 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 AC068790.3-201ENST00000602988 553 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 AL442639.1-201ENST00000625030 1899 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 DHX40P1-201ENST00000588725 1412 ntBASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHKBP1Q8TBC3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AL450345.1-202ENST00000605741 3881 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 RNU6-490P-201ENST00000362985 107 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 RNU6-82P-201ENST00000363970 107 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 RNU1-115P-201ENST00000365329 160 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 Y_RNA.493-201ENST00000384422 102 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 RNU6-823P-201ENST00000391042 103 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 RNU4-25P-201ENST00000410569 230 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 FAR2P2-201ENST00000413041 594 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AL590139.1-201ENST00000416267 400 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 EIF4EP1-201ENST00000422311 642 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 PDSS1P1-201ENST00000422953 1114 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 FAR2P4-202ENST00000425399 584 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 RPS26P40-201ENST00000435209 294 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 RPL7P28-201ENST00000437739 740 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AC114495.1-201ENST00000441274 436 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AL354714.3-201ENST00000447284 493 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 RPL23AP15-201ENST00000450202 459 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 RNU6-1132P-201ENST00000459214 107 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AC006463.2-201ENST00000473326 348 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 RN7SL319P-201ENST00000480656 221 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AC093267.1-201ENST00000489176 961 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 ENPP7P11-201ENST00000505915 627 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AC016559.2-201ENST00000510759 359 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 RRN3P3-201ENST00000549207 578 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 MIR7853-201ENST00000584820 132 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AL355297.3-201ENST00000604082 446 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AL161616.1-201ENST00000611867 286 ntBASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.29□□□□□ -1.56
SHKBP1Q8TBC3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 RN7SKP113-201ENST00000363891 295 ntBASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 RNY3P13-201ENST00000365542 102 ntBASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 RHOT1P2-201ENST00000366423 333 ntBASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 RNU6-921P-201ENST00000384361 107 ntBASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 MIR192-201ENST00000384915 110 ntBASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 AL391417.1-201ENST00000404100 426 ntBASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 RNU6-101P-201ENST00000410323 104 ntBASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 PGBD4P6-201ENST00000421501 610 ntBASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 CBX1P4-201ENST00000439415 457 ntBASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 AC009220.1-201ENST00000451614 275 ntBASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 AC004801.2-202ENST00000463559 283 ntBASIC5.28□□□□□ -1.56
SHKBP1Q8TBC3 AC008526.1-201ENST00000509149 338 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms