Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 MIR15A-201ENST00000607334 83 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 uc_338.26-201ENST00000612659 160 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 AC111152.1-202ENST00000635848 339 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 AC020656.2-201ENST00000613291 5309 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 AP001148.1-201ENST00000624124 2359 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 RNA5SP232-201ENST00000364144 119 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 RPS29P13-201ENST00000402041 169 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 AL080315.1-201ENST00000406055 466 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 RNA5SP296-201ENST00000410523 111 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 AC091286.1-201ENST00000431233 461 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 AC023141.3-201ENST00000436698 278 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 SETP5-201ENST00000437270 562 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 FTLP8-201ENST00000446770 267 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 AL360271.2-201ENST00000447710 161 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 AC016027.4-201ENST00000450866 277 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 RNU6-953P-201ENST00000459154 107 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 RN7SL188P-201ENST00000469842 285 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 AC083795.1-201ENST00000491760 320 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 AC018797.1-201ENST00000510791 255 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 AC093799.2-201ENST00000610062 578 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 U2.14-201ENST00000615943 113 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 AC123768.4-201ENST00000616244 701 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 AP001005.3-201ENST00000622049 129 ntBASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC116Q8IYX3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 LINC02555-201ENST00000563933 1951 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 RNU6-595P-201ENST00000363944 107 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 RNU1-59P-201ENST00000364829 162 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 SNORD50.2-201ENST00000365465 70 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 Y_RNA.541-201ENST00000384640 113 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 RPS4XP5-201ENST00000419038 768 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 MTND3P9-201ENST00000429526 346 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 RPL5P7-201ENST00000444235 813 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 snoU109.4-201ENST00000458953 143 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 AC133134.1-201ENST00000466800 359 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 AC010469.2-201ENST00000496412 480 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 RFPL4AP5-201ENST00000514977 504 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 AC025884.1-201ENST00000556034 378 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 RN7SL652P-201ENST00000577769 300 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 MIR3154-201ENST00000577829 84 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 LRRC37A5P-203ENST00000580181 585 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 MIR4502-201ENST00000580432 81 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 U1.25-201ENST00000614085 162 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 FAM27E2-201ENST00000619668 403 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 IQCB2P-201ENST00000401788 1633 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms