Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 MTND1P36-201ENST00000522384 936 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 AP004371.1-201ENST00000525240 214 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 MTCO3P13-201ENST00000577757 781 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 AC090666.1-201ENST00000578241 445 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 MTATP6P2-201ENST00000603319 678 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 VN1R74P-201ENST00000613259 503 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 AP000943.4-201ENST00000622912 357 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 AC009487.2-201ENST00000420969 6821 ntBASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC65Q8IXS2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 AC111188.2-201ENST00000529697 1387 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 RPL9P7-201ENST00000330965 580 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 RNU1-109P-201ENST00000383960 147 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 MT-TC-201ENST00000387405 66 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 MTND4LP20-201ENST00000402379 270 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 RNU4-78P-201ENST00000410940 126 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 MTCYBP32-201ENST00000427945 1084 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 MTCYBP15-201ENST00000433123 1127 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 RPS20P5-201ENST00000434808 360 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 HMGB1P25-201ENST00000468402 607 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 PABPC1P3-201ENST00000469174 459 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 GAPDHP39-201ENST00000481866 979 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 AC012182.1-201ENST00000570133 895 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 AP000238.1-201ENST00000608759 426 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 AC069234.5-201ENST00000611056 416 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 U73479.1-201ENST00000618062 168 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 AC006111.3-201ENST00000622137 383 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 AC233263.6-201ENST00000631132 1963 ntBASIC3.18□□□□□ -1.9
CCDC65Q8IXS2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 CD24P4-201ENST00000382840 243 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 RNU6-761P-201ENST00000384148 107 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 RPS6P14-201ENST00000425165 719 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 MTATP6P4-201ENST00000427725 675 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 AL390023.1-201ENST00000428836 262 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 AC006946.1-201ENST00000429106 328 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 SNRPEP4-201ENST00000435815 279 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 RPL39P40-201ENST00000445481 146 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 RSL24D1P3-201ENST00000449255 495 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 NIPA2P5-201ENST00000452282 464 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 RPS24P6-201ENST00000452670 400 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 AC244505.3-201ENST00000454598 187 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 AC084024.2-201ENST00000503480 791 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 AC010374.2-201ENST00000512933 535 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 SNORA31.1-201ENST00000515993 133 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 SNORA31.5-201ENST00000516190 133 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 SNORA70.24-201ENST00000517233 118 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 AC022080.3-201ENST00000544433 482 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 CYB5AP5-201ENST00000549779 389 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 AL513477.2-201ENST00000607858 568 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 AC092574.1-201ENST00000609771 420 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 AC107871.2-201ENST00000612894 502 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 AL110115.1-201ENST00000614396 364 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.17□□□□□ -1.9
CCDC65Q8IXS2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms