Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 RN7SKP60-201ENST00000516985 239 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 Y_RNA.717-201ENST00000517106 92 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 AL512347.1-201ENST00000566420 503 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 MIR4325-201ENST00000583049 90 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 SNRPGP15-201ENST00000600149 222 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 AC138932.5-201ENST00000617759 563 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 AC018692.3-201ENST00000623929 123 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 AP000676.4-201ENST00000624659 623 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 ZNF37BP-203ENST00000452306 1352 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 AP000776.1-201ENST00000530032 1663 ntBASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC60Q8IWA6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 AP002088.1-201ENST00000382740 395 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 MIR607-201ENST00000385241 96 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 RNU6-757P-201ENST00000410334 100 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 RPL23AP69-201ENST00000431134 458 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 AL353743.1-202ENST00000431724 1695 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 CST9LP2-201ENST00000437612 320 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 RPL39P6-201ENST00000448289 150 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 AP001992.1-205ENST00000462248 379 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 AC021146.8-201ENST00000507455 733 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 AC026412.2-201ENST00000512270 1075 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 MRPS36P3-201ENST00000519284 130 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 AP001636.2-201ENST00000525517 696 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 PDCL2P2-201ENST00000533651 189 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 AC023538.1-201ENST00000534576 736 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 AC245036.5-201ENST00000596330 847 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 VN1R78P-201ENST00000597393 564 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 uc_338.25-201ENST00000613756 156 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 AC021755.4-201ENST00000616620 456 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 U6.101-201ENST00000637707 76 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 MIR1322-201ENST00000638013 71 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 AC058791.1-201ENST00000608412 3198 ntBASIC3.57□□□□□ -1.84
CCDC60Q8IWA6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 PWAR6-201ENST00000552334 4618 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC005539.1-201ENST00000443768 1479 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 SNORA7.4-201ENST00000384249 137 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 RNU6-339P-201ENST00000384310 107 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 RNU4-78P-201ENST00000410940 126 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 RNU6-55P-201ENST00000411092 107 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 RNU6-954P-201ENST00000411355 107 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC007899.1-201ENST00000412776 775 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 TIMM9P2-201ENST00000419324 266 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 MTCO2P21-201ENST00000419780 677 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 MTCYBP24-201ENST00000420387 1106 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 OFD1P18Y-201ENST00000420889 959 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 AC010099.3-201ENST00000423896 409 ntBASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC60Q8IWA6 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms