Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.95□□□□□ -1.94
NUDCD3Q8IVD9 AL161431.1-201ENST00000618966 4205 ntBASIC2.95□□□□□ -1.94
NUDCD3Q8IVD9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 RNU1-33P-201ENST00000364249 162 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 SNORD65.1-201ENST00000390889 71 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 U3.42-201ENST00000408746 214 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 USP9YP21-201ENST00000420603 432 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 MTCO1P3-201ENST00000429327 192 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 SNRPEP4-201ENST00000435815 279 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 VN1R10P-201ENST00000447106 875 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AC112492.1-201ENST00000449607 712 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AC092757.1-201ENST00000467293 467 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AC008427.1-201ENST00000503102 655 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 PRELID3BP6-201ENST00000503839 571 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AC069306.1-201ENST00000507006 843 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 NCAPGP2-201ENST00000557911 754 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AL157394.1-201ENST00000562983 1224 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 MIR3158-1-201ENST00000583596 81 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AL031985.2-201ENST00000600955 480 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AP001330.4-201ENST00000604350 154 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AC245389.1-201ENST00000605141 529 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AC069234.5-201ENST00000611056 416 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AC107871.2-201ENST00000612894 502 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AC010975.3-201ENST00000618727 978 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AC006111.3-201ENST00000622137 383 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AC095031.1-201ENST00000623685 672 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AP003476.1-201ENST00000623984 516 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 AP000676.4-201ENST00000624659 623 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 Z99496.1-201ENST00000469424 1477 ntBASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NUDCD3Q8IVD9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 ANKRD36P1-201ENST00000344424 659 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 RNU1-35P-201ENST00000362782 153 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 U8.9-201ENST00000365667 134 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 ATP5F1P3-201ENST00000397213 657 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 RNA5SP38-201ENST00000410750 119 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AC099677.1-201ENST00000420575 175 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 PTP4A1P7-201ENST00000423476 514 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 MTND4LP10-201ENST00000435146 291 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AC079776.3-201ENST00000450665 370 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 snoU109.4-201ENST00000458953 143 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AC109925.1-201ENST00000478069 331 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 OR4G11P-201ENST00000492842 939 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 KLRA1P-201ENST00000503499 986 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AC006499.5-201ENST00000505037 514 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 HSPD1P15-201ENST00000505573 1122 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AC006390.1-201ENST00000508068 283 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AC026412.2-201ENST00000512270 1075 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 SNORA67.7-201ENST00000516664 135 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 RNU6-1028P-201ENST00000517164 93 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AP001189.2-201ENST00000527320 189 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 SNRPGP16-201ENST00000533275 226 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AC138915.2-201ENST00000569776 97 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AC096947.1-201ENST00000603233 470 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AL355810.1-201ENST00000614629 552 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AC253576.2-201ENST00000618815 580 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AC015967.1-201ENST00000619893 476 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AL353748.2-201ENST00000622148 471 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AC009039.2-201ENST00000624524 529 ntBASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
NUDCD3Q8IVD9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms