Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 FTLP6-201ENST00000355274 422 ntBASIC1.24□□□□□ -2.21
LINC00643Q86TS7 U8.3-201ENST00000363321 132 ntBASIC1.24□□□□□ -2.21
LINC00643Q86TS7 NDUFB4P4-201ENST00000404822 243 ntBASIC1.24□□□□□ -2.21
LINC00643Q86TS7 PTGES3P2-201ENST00000407942 482 ntBASIC1.24□□□□□ -2.21
LINC00643Q86TS7 RNU2-65P-201ENST00000410162 185 ntBASIC1.24□□□□□ -2.21
LINC00643Q86TS7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC00643Q86TS7 AC087499.2-201ENST00000432861 149 ntBASIC1.24□□□□□ -2.21
LINC00643Q86TS7 AL645638.1-201ENST00000440519 361 ntBASIC1.24□□□□□ -2.21
LINC00643Q86TS7 AL118520.1-201ENST00000450770 291 ntBASIC1.24□□□□□ -2.21
LINC00643Q86TS7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.24□□□□□ -2.21
LINC00643Q86TS7 MTATP6P7-201ENST00000453315 681 ntBASIC1.24□□□□□ -2.21
LINC00643Q86TS7 RPL7P49-201ENST00000471402 708 ntBASIC1.24□□□□□ -2.21
LINC00643Q86TS7 RPS29P20-201ENST00000489592 171 ntBASIC1.24□□□□□ -2.21
LINC00643Q86TS7 AC096745.1-201ENST00000509945 370 ntBASIC1.24□□□□□ -2.21
LINC00643Q86TS7 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC00643Q86TS7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC00643Q86TS7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC00643Q86TS7 AC007458.1-201ENST00000542812 373 ntBASIC1.24□□□□□ -2.21
LINC00643Q86TS7 AC074029.1-201ENST00000552531 1044 ntBASIC1.24□□□□□ -2.21
LINC00643Q86TS7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
LINC00643Q86TS7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC00643Q86TS7 MIR5680-201ENST00000577577 84 ntBASIC1.24□□□□□ -2.21
LINC00643Q86TS7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC00643Q86TS7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC00643Q86TS7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.24□□□□□ -2.21
LINC00643Q86TS7 MIR7155-201ENST00000615925 56 ntBASIC1.24□□□□□ -2.21
LINC00643Q86TS7 AC092650.2-201ENST00000619984 902 ntBASIC1.24□□□□□ -2.21
LINC00643Q86TS7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.24□□□□□ -2.21
LINC00643Q86TS7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
LINC00643Q86TS7 RNU6-666P-201ENST00000363499 107 ntBASIC1.23□□□□□ -2.21
LINC00643Q86TS7 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC1.23□□□□□ -2.21
LINC00643Q86TS7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
LINC00643Q86TS7 U3.20-201ENST00000390909 217 ntBASIC1.23□□□□□ -2.21
LINC00643Q86TS7 RNU6-837P-201ENST00000391056 108 ntBASIC1.23□□□□□ -2.21
LINC00643Q86TS7 SPTLC1P2-201ENST00000407089 121 ntBASIC1.23□□□□□ -2.21
LINC00643Q86TS7 RNU2-17P-201ENST00000410290 190 ntBASIC1.23□□□□□ -2.21
LINC00643Q86TS7 CASKP1-201ENST00000412870 582 ntBASIC1.23□□□□□ -2.21
LINC00643Q86TS7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.23□□□□□ -2.21
LINC00643Q86TS7 RPL7P2-201ENST00000427639 268 ntBASIC1.23□□□□□ -2.21
LINC00643Q86TS7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.23□□□□□ -2.21
LINC00643Q86TS7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.23□□□□□ -2.21
LINC00643Q86TS7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.23□□□□□ -2.21
LINC00643Q86TS7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.23□□□□□ -2.21
LINC00643Q86TS7 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC1.23□□□□□ -2.21
LINC00643Q86TS7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.23□□□□□ -2.21
LINC00643Q86TS7 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC1.23□□□□□ -2.21
LINC00643Q86TS7 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.23□□□□□ -2.21
LINC00643Q86TS7 ATP5F1P5-201ENST00000526403 760 ntBASIC1.23□□□□□ -2.21
LINC00643Q86TS7 AL121594.4-201ENST00000556211 1196 ntBASIC1.23□□□□□ -2.21
LINC00643Q86TS7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC1.23□□□□□ -2.21
LINC00643Q86TS7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.23□□□□□ -2.21
LINC00643Q86TS7 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC1.23□□□□□ -2.21
LINC00643Q86TS7 AL020997.2-201ENST00000602607 184 ntBASIC1.23□□□□□ -2.21
LINC00643Q86TS7 AL355812.1-201ENST00000603215 216 ntBASIC1.23□□□□□ -2.21
LINC00643Q86TS7 AC007619.2-201ENST00000605743 379 ntBASIC1.23□□□□□ -2.21
LINC00643Q86TS7 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
LINC00643Q86TS7 AC016769.4-201ENST00000616893 535 ntBASIC1.23□□□□□ -2.21
LINC00643Q86TS7 MIR6778-201ENST00000617912 73 ntBASIC1.23□□□□□ -2.21
LINC00643Q86TS7 AC009159.1-201ENST00000618386 642 ntBASIC1.23□□□□□ -2.21
LINC00643Q86TS7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.23□□□□□ -2.21
LINC00643Q86TS7 AC007204.1-201ENST00000621794 555 ntBASIC1.23□□□□□ -2.21
LINC00643Q86TS7 AP001784.1-201ENST00000624107 428 ntBASIC1.23□□□□□ -2.21
LINC00643Q86TS7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
LINC00643Q86TS7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.23□□□□□ -2.21
LINC00643Q86TS7 Z99496.1-201ENST00000469424 1477 ntBASIC1.23□□□□□ -2.21
LINC00643Q86TS7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC1.22□□□□□ -2.21
LINC00643Q86TS7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.22□□□□□ -2.21
LINC00643Q86TS7 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
LINC00643Q86TS7 MIR550A3-201ENST00000390735 95 ntBASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AC245052.5-201ENST00000416320 649 ntBASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AL357078.2-201ENST00000416486 427 ntBASIC1.22□□□□□ -2.21
LINC00643Q86TS7 SEPT2P1-201ENST00000419651 180 ntBASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC1.22□□□□□ -2.21
LINC00643Q86TS7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.22□□□□□ -2.21
LINC00643Q86TS7 NANOGP5-201ENST00000424456 877 ntBASIC1.22□□□□□ -2.21
LINC00643Q86TS7 RPL7P44-201ENST00000424827 742 ntBASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AC018644.1-201ENST00000429934 551 ntBASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AC018634.1-201ENST00000437554 401 ntBASIC1.22□□□□□ -2.21
LINC00643Q86TS7 USP9YP8-201ENST00000441913 500 ntBASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AL627224.1-201ENST00000448334 444 ntBASIC1.22□□□□□ -2.21
LINC00643Q86TS7 snoU13.7-201ENST00000459220 104 ntBASIC1.22□□□□□ -2.21
LINC00643Q86TS7 snoU13.3-201ENST00000459441 104 ntBASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AC055855.1-201ENST00000489563 579 ntBASIC1.22□□□□□ -2.21
LINC00643Q86TS7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.22□□□□□ -2.21
LINC00643Q86TS7 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.22□□□□□ -2.21
LINC00643Q86TS7 MTCYBP20-201ENST00000524239 1129 ntBASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AC022880.1-201ENST00000534017 973 ntBASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AC025423.2-201ENST00000537570 439 ntBASIC1.22□□□□□ -2.21
LINC00643Q86TS7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms