Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 AC008669.1-201ENST00000565823 2178 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 AC005261.2-201ENST00000593427 4258 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 RNA5SP326-201ENST00000363209 110 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 SNORA74A-201ENST00000364089 198 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 RNU5E-6P-201ENST00000365574 115 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 RNU6-121P-201ENST00000410525 99 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 RN7SKP293-201ENST00000411389 296 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 RNU2-71P-201ENST00000411395 189 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 AC096921.1-201ENST00000411661 375 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 RPL21P109-201ENST00000422213 475 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 PSMA2P3-201ENST00000429685 675 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 MTCO3P29-201ENST00000432119 779 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 AL353597.2-202ENST00000434901 373 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 RN7SL269P-201ENST00000467795 305 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 AC105384.2-201ENST00000508433 640 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 RNU6-323P-201ENST00000521915 107 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 AC073410.2-201ENST00000603240 332 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 AP001282.2-201ENST00000616149 309 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 MIR6719-201ENST00000622428 87 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 AC130454.1-201ENST00000622948 401 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 CYP3A51P-201ENST00000633513 256 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 AC055839.1-201ENST00000634467 498 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 AC000374.1-201ENST00000434698 1745 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 AC004817.4-201ENST00000602396 3625 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 AL672167.1-204ENST00000641875 3017 ntBASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
FOXR1Q6PIV2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AC108751.5-201ENST00000492880 1336 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 RNU1-150P-201ENST00000362491 162 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 SNORD50B-201ENST00000364995 70 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 RNA5SP211-201ENST00000365516 117 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 RNA5SP241-201ENST00000391326 114 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 RPLP0P7-201ENST00000416050 667 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AC108032.1-201ENST00000416706 207 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 RPL12P34-201ENST00000424532 479 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 FCF1P4-201ENST00000448326 183 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AP001992.1-205ENST00000462248 379 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 LSM6P2-201ENST00000552208 177 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AL121576.1-201ENST00000556055 276 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AC010547.6-201ENST00000571789 193 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 MIR3176-201ENST00000582210 90 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AC005899.2-201ENST00000584353 90 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AL139124.1-201ENST00000609123 421 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AC064801.1-201ENST00000612025 407 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AP005432.1-201ENST00000580891 3485 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 AL078621.3-201ENST00000623707 2042 ntBASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
FOXR1Q6PIV2 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 ZNF33CP-201ENST00000432492 2030 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 AC107081.3-201ENST00000612715 2034 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms