Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
ZNF544Q6NX49 RNU2-21P-201ENST00000410368 188 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 Z99755.1-201ENST00000414048 380 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3□□□□□ -1.93
ZNF544Q6NX49 FCF1P2-201ENST00000415284 583 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 AL008987.1-201ENST00000415528 237 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3□□□□□ -1.93
ZNF544Q6NX49 OR1AA1P-201ENST00000419597 916 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 AC010099.3-201ENST00000423896 409 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3□□□□□ -1.93
ZNF544Q6NX49 RPS26P56-201ENST00000444468 240 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3□□□□□ -1.93
ZNF544Q6NX49 RPL29P29-201ENST00000448725 423 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 SSXP4-201ENST00000451349 245 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 RPL21P134-201ENST00000453468 483 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 HMGN3P1-201ENST00000453847 193 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 AC007967.1-201ENST00000455422 1159 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 RN7SL807P-201ENST00000470923 297 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 RPL23AP55-201ENST00000498163 452 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 KLRA1P-201ENST00000503499 986 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 AC091951.3-201ENST00000504093 246 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 AC112198.1-201ENST00000505369 1220 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 AC079395.1-201ENST00000510981 262 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 RPL7L1P13-201ENST00000511702 739 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 APOOP4-201ENST00000513530 597 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3□□□□□ -1.93
ZNF544Q6NX49 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3□□□□□ -1.93
ZNF544Q6NX49 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3□□□□□ -1.93
ZNF544Q6NX49 AC027309.2-201ENST00000520566 192 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3□□□□□ -1.93
ZNF544Q6NX49 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3□□□□□ -1.93
ZNF544Q6NX49 AP000790.1-201ENST00000528891 737 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3□□□□□ -1.93
ZNF544Q6NX49 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3□□□□□ -1.93
ZNF544Q6NX49 OR8L1P-201ENST00000534005 955 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3□□□□□ -1.93
ZNF544Q6NX49 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3□□□□□ -1.93
ZNF544Q6NX49 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3□□□□□ -1.93
ZNF544Q6NX49 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3□□□□□ -1.93
ZNF544Q6NX49 MTCYBP27-201ENST00000555160 670 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3□□□□□ -1.93
ZNF544Q6NX49 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3□□□□□ -1.93
ZNF544Q6NX49 AC093519.1-201ENST00000566109 298 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3□□□□□ -1.93
ZNF544Q6NX49 MIR5195-201ENST00000583555 115 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3□□□□□ -1.93
ZNF544Q6NX49 ACTR3BP1-201ENST00000605584 1247 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
ZNF544Q6NX49 U4.6-201ENST00000621618 127 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 RNU6-156P-201ENST00000621869 107 ntBASIC3□□□□□ -1.93
ZNF544Q6NX49 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ZNF544Q6NX49 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3□□□□□ -1.93
ZNF544Q6NX49 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3□□□□□ -1.93
ZNF544Q6NX49 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3□□□□□ -1.93
ZNF544Q6NX49 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
ZNF544Q6NX49 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ZNF544Q6NX49 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
ZNF544Q6NX49 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AC109315.1-201ENST00000584143 1347 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 FAM133CP-201ENST00000332869 704 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 RNA5SP391-201ENST00000363456 119 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 TAF9BP1-201ENST00000396646 746 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AF228730.1-201ENST00000397972 663 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AL049545.1-201ENST00000401856 572 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 BOLA3P4-201ENST00000418151 400 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AC092634.6-201ENST00000418558 192 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 RPP40P1-201ENST00000426762 456 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 RPL7P34-201ENST00000433316 712 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 YWHAZP8-201ENST00000436935 731 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 CST9LP2-201ENST00000437612 320 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 HSPE1P28-201ENST00000443139 211 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 Z77249.1-201ENST00000444622 1175 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 UQCRHP3-201ENST00000451503 251 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 snoU13.24-201ENST00000458998 104 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AC006483.1-201ENST00000487308 313 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AC104090.1-201ENST00000506341 1171 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 FCF1P8-201ENST00000510322 597 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 SNORA70.24-201ENST00000517233 118 ntBASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.99□□□□□ -1.93
ZNF544Q6NX49 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms