Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 RPL21P66-201ENST00000426566 466 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AC133104.1-201ENST00000429100 218 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AC024082.2-201ENST00000434771 238 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AC079448.1-201ENST00000449377 373 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 NANOGP10-201ENST00000453325 895 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AL049714.1-201ENST00000466686 347 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 RN7SL329P-201ENST00000467740 299 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 RNU6-64P-201ENST00000517119 105 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AP001922.4-201ENST00000526967 290 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 SNRPGP16-201ENST00000533275 226 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 UBE2FP2-201ENST00000566646 462 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 BNIP3P33-201ENST00000598912 569 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AC004067.1-201ENST00000608733 700 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AC068792.1-201ENST00000621354 417 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AL136313.1-201ENST00000624804 202 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 ZNF137P-201ENST00000456718 1920 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 AC027514.1-201ENST00000588561 1603 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 Y_RNA.6-201ENST00000362350 114 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 U3.11-201ENST00000364476 212 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 SNORA71.2-201ENST00000364941 134 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 Y_RNA.516-201ENST00000384541 124 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 SDHCP2-201ENST00000398565 501 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 RPL21P24-201ENST00000413752 448 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 AC007283.2-201ENST00000424739 197 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 MTATP6P4-201ENST00000427725 675 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 AF228730.2-201ENST00000438784 848 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 AC005094.1-201ENST00000440420 368 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 AC016696.1-201ENST00000446949 318 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 C1DP4-201ENST00000455429 424 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 AC108078.1-201ENST00000508073 725 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 IGKV1-32-201ENST00000519290 311 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 AL845331.3-202ENST00000562856 261 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 AC091042.1-201ENST00000579213 173 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 AP000860.1-201ENST00000605250 559 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 MIR432-201ENST00000606207 94 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 AC133644.2-201ENST00000608142 540 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 AL355810.1-201ENST00000614629 552 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 MIR6853-201ENST00000619642 74 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 U3.53-201ENST00000628922 216 ntBASIC4.22□□□□□ -1.73
RNF220Q5VTB9 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF220Q5VTB9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.21□□□□□ -1.73
RNF220Q5VTB9 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.21□□□□□ -1.73
RNF220Q5VTB9 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 USP8P1-201ENST00000494673 3183 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 SNORA23-201ENST00000365128 182 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms