Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 AP001284.1-201ENST00000528393 2118 ntBASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL13A1Q5TAT6 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 Y_RNA.47-201ENST00000362697 108 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 RNA5SP326-201ENST00000363209 110 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 Y_RNA.176-201ENST00000363815 109 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 RNU6-1040P-201ENST00000383974 107 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 Y_RNA.476-201ENST00000384347 108 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 Y_RNA.500-201ENST00000384466 111 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 SNORA48.4-201ENST00000391089 134 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 RPL7P10-201ENST00000417407 739 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 MCFD2P1-201ENST00000417812 300 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 AC009965.2-201ENST00000425328 970 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 AL031736.2-201ENST00000426573 787 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 NOP56P2-201ENST00000447491 769 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 MTCO3P10-201ENST00000455912 772 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 U8.20-201ENST00000459445 131 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 AC004801.2-202ENST00000463559 283 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 AL136126.1-201ENST00000473603 402 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 SNRPCP3-201ENST00000474888 476 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 AC106872.2-201ENST00000494303 480 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 AC020893.1-201ENST00000502452 580 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 RNU6-1038P-201ENST00000516516 104 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 RNU6-347P-201ENST00000516658 105 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 AP002404.1-201ENST00000532005 451 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 AC113194.1-201ENST00000606037 500 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 AC012409.4-201ENST00000612923 249 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 AL049794.2-201ENST00000616301 365 ntBASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL13A1Q5TAT6 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 AL442639.1-201ENST00000625030 1899 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 Y_RNA.5-201ENST00000362334 102 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 RNU6-1115P-201ENST00000362490 106 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 RNU6-601P-201ENST00000384540 107 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 MIR92A2-201ENST00000385299 75 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 RNU4-46P-201ENST00000410818 138 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 RN7SKP284-201ENST00000411002 343 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 AC011933.1-201ENST00000413334 321 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 SKA2P1-201ENST00000425592 390 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 USP9YP16-201ENST00000430287 407 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 RPS29P17-201ENST00000430795 166 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 EZH2P1-201ENST00000431167 291 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 AC016696.1-201ENST00000446949 318 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 AL354710.1-201ENST00000453641 246 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 USP9YP23-201ENST00000455085 407 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 AC116533.1-201ENST00000459748 321 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 RN7SL809P-201ENST00000482040 297 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 AC015911.1-201ENST00000495111 156 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 HMGN1P9-201ENST00000515212 298 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 GAPDHP62-201ENST00000515313 990 ntBASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.66□□□□□ -1.5
COL13A1Q5TAT6 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms