Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 MIR448-201ENST00000362131 111 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 RNU6-1090P-201ENST00000364065 94 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 SNORD82-201ENST00000365530 70 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 MRPL42P2-201ENST00000403169 426 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 RNA5SP317-201ENST00000410176 116 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 RNA5SP311-201ENST00000411290 116 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AC127391.1-201ENST00000411737 98 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AL356276.2-201ENST00000435919 558 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 RPL7P15-201ENST00000461190 712 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AC103987.1-201ENST00000473394 348 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AC017037.1-201ENST00000508460 471 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 RNA5SP315-201ENST00000516340 116 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 Y_RNA.704-201ENST00000516851 102 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 RNA5SP312-201ENST00000517068 116 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AL121579.1-201ENST00000555129 305 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AC034268.2-201ENST00000571784 482 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AC006504.3-201ENST00000586818 523 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AC020910.2-201ENST00000603635 610 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AL139286.1-201ENST00000604465 483 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AL365503.1-201ENST00000605247 905 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 MIR98-201ENST00000606724 119 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AC064801.1-201ENST00000612025 407 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AL133173.2-201ENST00000614270 90 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AC004009.2-201ENST00000623016 728 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 AC008785.1-201ENST00000624475 456 ntBASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC178Q5BJE1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AC024560.2-201ENST00000507981 1497 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AC097504.1-201ENST00000515103 2415 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AC011155.1-201ENST00000316512 456 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AL161781.1-201ENST00000354277 403 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 SNORD115.1-201ENST00000391109 76 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 RNU11-4P-201ENST00000391149 133 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 CIR1P3-201ENST00000405137 479 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 RPS3AP24-201ENST00000407896 734 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 USP9YP6-201ENST00000413550 854 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 RPS15AP40-201ENST00000419621 391 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AL590233.1-201ENST00000430017 456 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 RPS20P1-201ENST00000434853 354 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 MTCYBP45-201ENST00000435243 565 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 NDUFS5P3-201ENST00000450668 321 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 C1DP4-201ENST00000455429 424 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AC006517.1-201ENST00000480485 328 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 FCF1P3-201ENST00000496394 590 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AP001893.2-201ENST00000526949 202 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AC123904.2-201ENST00000548059 300 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AC053481.3-201ENST00000577881 843 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AC012417.1-201ENST00000582307 1039 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 MIR5684-201ENST00000585074 65 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 NRBF2P1-201ENST00000587407 859 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 RNU6-87P-201ENST00000607561 108 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 OR6R2P-201ENST00000609216 300 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AL031666.3-201ENST00000609320 1006 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AC006338.1-201ENST00000618453 749 ntBASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC178Q5BJE1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms