Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RSPO4Q2I0M5 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 RNU6-153P-201ENST00000364422 104 ntBASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 RNU6-44P-201ENST00000384045 107 ntBASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 Y_RNA.471-201ENST00000384312 102 ntBASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 AL009179.1-201ENST00000406085 265 ntBASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 RNA5SP251-201ENST00000410614 137 ntBASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 RPL31P45-201ENST00000419532 356 ntBASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 AL158071.1-201ENST00000430315 461 ntBASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 AL445305.1-201ENST00000432577 575 ntBASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 AL162739.1-201ENST00000450606 307 ntBASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 RN7SL809P-201ENST00000482040 297 ntBASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 AC090115.3-201ENST00000553218 849 ntBASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 SNORD39.3-201ENST00000584451 71 ntBASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 AC245517.5-201ENST00000611529 162 ntBASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 AC005225.5-201ENST00000623547 2225 ntBASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO4Q2I0M5 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 RNU6-804P-201ENST00000384286 107 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 RNU6-1127P-201ENST00000384580 107 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 MIR215-201ENST00000384858 110 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 MIR600-201ENST00000385007 98 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 EIF5P1-201ENST00000400019 1231 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 AL445189.1-201ENST00000405722 338 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 SNORA11F-201ENST00000408237 128 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 RPL23AP69-201ENST00000431134 458 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 RPL23AP22-201ENST00000437556 453 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 AC004866.2-201ENST00000438285 481 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 H3F3BP1-201ENST00000440551 403 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 RPS15AP1-201ENST00000457423 391 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 PPIAP21-201ENST00000464473 501 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 RPS27P26-201ENST00000494583 239 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 AC091042.1-201ENST00000579213 173 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 MIR3144-201ENST00000579460 79 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 AC060771.1-201ENST00000582031 164 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 Z83818.1-201ENST00000603584 150 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 AC008162.1-201ENST00000604718 254 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 AL670379.4-201ENST00000605279 254 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 AC123768.4-201ENST00000616244 701 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 AC008785.1-201ENST00000624475 456 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 AP000843.1-201ENST00000624880 701 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 AC055839.1-201ENST00000634467 498 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 OR52B5P-204ENST00000641744 3467 ntBASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RSPO4Q2I0M5 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms