Protein–RNA interactions for Protein: Q12860

CNTN1, Contactin-1, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1Q12860 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.38□□□□□ -1.87
CNTN1Q12860 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CNTN1Q12860 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 RNU6-525P-201ENST00000363685 104 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CNTN1Q12860 RNU6-878P-201ENST00000384578 110 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 HMGN1P24-201ENST00000412282 298 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.37□□□□□ -1.87
CNTN1Q12860 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.37□□□□□ -1.87
CNTN1Q12860 MTND4P6-201ENST00000438297 472 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.37□□□□□ -1.87
CNTN1Q12860 Z75741.1-201ENST00000446793 314 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 AC115115.1-201ENST00000449927 248 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.37□□□□□ -1.87
CNTN1Q12860 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CNTN1Q12860 AL445669.2-201ENST00000454425 421 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 ANKRD26P4-201ENST00000455755 950 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 snoU13.24-201ENST00000458998 104 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 AC078785.3-201ENST00000476607 425 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 AC090453.1-201ENST00000495560 436 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.37□□□□□ -1.87
CNTN1Q12860 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.37□□□□□ -1.87
CNTN1Q12860 Y_RNA.717-201ENST00000517106 92 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CNTN1Q12860 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.37□□□□□ -1.87
CNTN1Q12860 AC005476.1-201ENST00000554427 397 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CNTN1Q12860 AL354943.1-201ENST00000572103 781 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 AC006270.2-201ENST00000578523 652 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 MIR4425-201ENST00000580572 84 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.37□□□□□ -1.87
CNTN1Q12860 AC010928.3-201ENST00000587712 541 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 SNRPGP15-201ENST00000600149 222 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 VN1R82P-201ENST00000601481 356 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 AC006254.3-201ENST00000603353 884 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 AC103881.1-201ENST00000603476 538 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 AL592221.1-201ENST00000605266 382 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 AC025588.4-201ENST00000615802 908 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 AC009159.2-201ENST00000617603 606 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CNTN1Q12860 AC231657.1-201ENST00000624313 397 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 AP000676.4-201ENST00000624659 623 ntBASIC3.37□□□□□ -1.87
CNTN1Q12860 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.37□□□□□ -1.87
CNTN1Q12860 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CNTN1Q12860 AL513302.2-201ENST00000562313 1842 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CNTN1Q12860 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CNTN1Q12860 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CNTN1Q12860 RNA5SP258-201ENST00000362750 119 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 RNU6-335P-201ENST00000364563 113 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 HMGB1P17-201ENST00000403495 628 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 PSMA6P3-201ENST00000428242 164 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.36□□□□□ -1.87
CNTN1Q12860 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.36□□□□□ -1.87
CNTN1Q12860 CYCSP32-201ENST00000440548 321 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.36□□□□□ -1.87
CNTN1Q12860 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.36□□□□□ -1.87
CNTN1Q12860 AC005297.2-201ENST00000450430 606 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 AC097262.1-201ENST00000452559 548 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 AC097493.1-201ENST00000463958 372 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.36□□□□□ -1.87
CNTN1Q12860 AC017015.1-201ENST00000477387 286 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.36□□□□□ -1.87
CNTN1Q12860 DSTNP2-201ENST00000504533 515 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.36□□□□□ -1.87
CNTN1Q12860 APOOP4-201ENST00000513530 597 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.36□□□□□ -1.87
CNTN1Q12860 RNU6-27P-201ENST00000516146 107 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 RN7SKP60-201ENST00000516985 239 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 AC105185.1-201ENST00000518705 535 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 HSPA8P13-201ENST00000523715 472 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 DEFB131D-201ENST00000526803 184 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.36□□□□□ -1.87
CNTN1Q12860 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.36□□□□□ -1.87
CNTN1Q12860 TGIF1P1-201ENST00000558095 802 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 CYCSP2-201ENST00000558168 301 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 MIR5680-201ENST00000577577 84 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 VN1R78P-201ENST00000597393 564 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 CKS1BP3-201ENST00000600888 237 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.36□□□□□ -1.87
CNTN1Q12860 AC091925.2-201ENST00000625059 256 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CNTN1Q12860 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.36□□□□□ -1.87
CNTN1Q12860 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CNTN1Q12860 MTND4P34-201ENST00000572715 1371 ntBASIC3.36□□□□□ -1.87
CNTN1Q12860 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CNTN1Q12860 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CNTN1Q12860 RNU6-1214P-201ENST00000363650 109 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 RPL17P50-201ENST00000396131 546 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 RSL24D1P4-201ENST00000400938 484 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 RNU2-15P-201ENST00000410692 191 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.35□□□□□ -1.87
CNTN1Q12860 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.35□□□□□ -1.87
CNTN1Q12860 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CNTN1Q12860 AC063979.1-201ENST00000415539 377 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.35□□□□□ -1.87
CNTN1Q12860 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.35□□□□□ -1.87
CNTN1Q12860 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.35□□□□□ -1.87
CNTN1Q12860 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms