Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.51□□□□□ -1.85
GABPAQ06546 AC244098.2-201ENST00000422068 99 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 MTND2P9-201ENST00000422293 931 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
GABPAQ06546 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.51□□□□□ -1.85
GABPAQ06546 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
GABPAQ06546 VN1R10P-201ENST00000447106 875 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 AC006539.3-201ENST00000454258 129 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 RFC5P1-201ENST00000454419 874 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 SYPL1P1-201ENST00000473622 768 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 AC092451.1-201ENST00000480211 153 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 RPL5P23-201ENST00000496040 868 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 KLRA1P-201ENST00000503499 986 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.51□□□□□ -1.85
GABPAQ06546 AC010460.2-201ENST00000509054 677 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 MTCYBP16-201ENST00000509187 1129 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 RNU6-415P-201ENST00000516252 97 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 RNU2-58P-201ENST00000516403 183 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 RN7SKP272-201ENST00000516988 232 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 OR5G4P-201ENST00000525251 760 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.51□□□□□ -1.85
GABPAQ06546 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
GABPAQ06546 MTND1P8-201ENST00000571424 950 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 AC090616.5-202ENST00000582111 297 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.51□□□□□ -1.85
GABPAQ06546 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.51□□□□□ -1.85
GABPAQ06546 AC007687.1-201ENST00000602704 304 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 AC016877.3-201ENST00000606778 504 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 AC008121.2-201ENST00000614647 523 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 AC009318.4-201ENST00000620496 486 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
GABPAQ06546 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
GABPAQ06546 AC109315.1-201ENST00000584143 1347 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
GABPAQ06546 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
GABPAQ06546 AC096644.4-201ENST00000563417 2912 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 SNORD56.3-201ENST00000363507 71 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
GABPAQ06546 SNRPEP2-201ENST00000397592 279 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
GABPAQ06546 RNA5SP56-201ENST00000410277 118 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 FNDC3CP-201ENST00000420795 1155 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.5□□□□□ -1.85
GABPAQ06546 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 SETP5-201ENST00000437270 562 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 AL138799.3-201ENST00000438968 350 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 RPL23AP76-201ENST00000441860 458 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 AC007327.1-201ENST00000447461 264 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 AC011979.1-201ENST00000472300 483 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.5□□□□□ -1.85
GABPAQ06546 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.5□□□□□ -1.85
GABPAQ06546 AC078817.1-201ENST00000492623 435 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 AC134050.1-201ENST00000495088 933 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 OR5H5P-201ENST00000503164 928 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 AC083906.5-201ENST00000503722 328 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
GABPAQ06546 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
GABPAQ06546 HIGD1AP13-201ENST00000509878 289 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 AC008837.2-201ENST00000513076 418 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 RN7SKP289-201ENST00000517244 295 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.5□□□□□ -1.85
GABPAQ06546 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.5□□□□□ -1.85
GABPAQ06546 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.5□□□□□ -1.85
GABPAQ06546 AP003385.6-201ENST00000531603 374 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 AL132857.1-201ENST00000555180 708 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 AC023813.2-201ENST00000564321 469 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 AC006270.2-201ENST00000578523 652 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 AL669831.4-202ENST00000590817 238 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.5□□□□□ -1.85
GABPAQ06546 AL355812.1-201ENST00000603215 216 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 MTND3P19-201ENST00000603825 345 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 DPRXP5-201ENST00000604662 539 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 AC106052.1-201ENST00000608029 497 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 AC027449.1-201ENST00000608890 407 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
GABPAQ06546 MIR7106-201ENST00000612419 65 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 AC023158.2-201ENST00000614876 543 ntBASIC3.5□□□□□ -1.85
GABPAQ06546 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.5□□□□□ -1.85
GABPAQ06546 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.5□□□□□ -1.85
GABPAQ06546 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.5□□□□□ -1.85
GABPAQ06546 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
GABPAQ06546 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.5□□□□□ -1.85
GABPAQ06546 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
GABPAQ06546 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.49□□□□□ -1.85
GABPAQ06546 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
GABPAQ06546 OR5J1P-201ENST00000313544 939 ntBASIC3.49□□□□□ -1.85
GABPAQ06546 RNU6-730P-201ENST00000383954 104 ntBASIC3.49□□□□□ -1.85
GABPAQ06546 Y_RNA.408-201ENST00000383987 102 ntBASIC3.49□□□□□ -1.85
GABPAQ06546 ARF4P3-201ENST00000397387 509 ntBASIC3.49□□□□□ -1.85
GABPAQ06546 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.49□□□□□ -1.85
GABPAQ06546 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.49□□□□□ -1.85
GABPAQ06546 AL356320.2-201ENST00000417263 507 ntBASIC3.49□□□□□ -1.85
GABPAQ06546 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.49□□□□□ -1.85
GABPAQ06546 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.49□□□□□ -1.85
GABPAQ06546 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.49□□□□□ -1.85
GABPAQ06546 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.49□□□□□ -1.85
GABPAQ06546 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.49□□□□□ -1.85
GABPAQ06546 RNU7-170P-201ENST00000459303 61 ntBASIC3.49□□□□□ -1.85
GABPAQ06546 RPL23AP14-201ENST00000468281 468 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms