Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HOXC5Q00444 RNA5SP310-201ENST00000459084 116 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXC5Q00444 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HOXC5Q00444 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXC5Q00444 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.31□□□□□ -2.04
HOXC5Q00444 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.31□□□□□ -2.04
HOXC5Q00444 AC126177.3-201ENST00000551839 688 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.31□□□□□ -2.04
HOXC5Q00444 AC027104.1-201ENST00000563702 681 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 AC090666.1-201ENST00000578241 445 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXC5Q00444 VN1R92P-201ENST00000598511 928 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 AL049779.4-201ENST00000604500 156 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 AL035413.2-201ENST00000604801 525 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 AC135507.2-201ENST00000612443 309 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 AC092650.2-201ENST00000619984 902 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 AP000676.4-201ENST00000624659 623 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HOXC5Q00444 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HOXC5Q00444 MAPK10-322ENST00000641485 4530 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
HOXC5Q00444 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
HOXC5Q00444 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HOXC5Q00444 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
HOXC5Q00444 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
HOXC5Q00444 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.3□□□□□ -2.04
HOXC5Q00444 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
HOXC5Q00444 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HOXC5Q00444 AL672167.1-206ENST00000356293 943 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 RNA5SP27-201ENST00000363839 119 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 SNORD115-48-201ENST00000364764 76 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 RNU6-441P-201ENST00000384545 106 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 MIR34A-201ENST00000385130 110 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 AL139039.1-201ENST00000401900 692 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXC5Q00444 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXC5Q00444 COTL1P1-201ENST00000422309 375 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXC5Q00444 MTND4P24-201ENST00000424002 397 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 AL035410.1-201ENST00000427409 427 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXC5Q00444 UBBP3-201ENST00000445497 241 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 Z96811.1-201ENST00000445880 108 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 AC108938.1-201ENST00000451204 136 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 RPL23AP23-201ENST00000452590 471 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 AC126182.1-201ENST00000478134 357 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXC5Q00444 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HOXC5Q00444 ERHP1-201ENST00000523006 310 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.3□□□□□ -2.04
HOXC5Q00444 EIF4BP1-201ENST00000554881 351 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXC5Q00444 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXC5Q00444 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXC5Q00444 HMGB1P6-201ENST00000569046 646 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 MIR5092-201ENST00000583139 88 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.3□□□□□ -2.04
HOXC5Q00444 DUXAP3-201ENST00000603616 594 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 AC091046.2-201ENST00000620775 665 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.3□□□□□ -2.04
HOXC5Q00444 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.3□□□□□ -2.04
HOXC5Q00444 BX649567.1-201ENST00000642071 1134 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 AC233263.6-201ENST00000631132 1963 ntBASIC2.3□□□□□ -2.04
HOXC5Q00444 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HOXC5Q00444 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.3□□□□□ -2.04
HOXC5Q00444 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HOXC5Q00444 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.29□□□□□ -2.04
HOXC5Q00444 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
HOXC5Q00444 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HOXC5Q00444 MTCO1P18-201ENST00000455518 1419 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HOXC5Q00444 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HOXC5Q00444 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HOXC5Q00444 SNORA14A-201ENST00000364773 135 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 U8.8-201ENST00000365399 135 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.29□□□□□ -2.04
HOXC5Q00444 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXC5Q00444 PNRC2P1-201ENST00000423940 420 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 MTCO2P17-201ENST00000424336 677 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 RPP40P1-201ENST00000426762 456 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 AC096632.1-201ENST00000427395 310 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 AC006548.1-201ENST00000427470 102 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 UBE2V1P6-201ENST00000430840 422 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 ZNF965P-201ENST00000432501 817 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 SNRPEP4-201ENST00000435815 279 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 FABP5P3-201ENST00000437960 408 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXC5Q00444 RPL23AP58-201ENST00000440453 469 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.29□□□□□ -2.04
HOXC5Q00444 AP000852.1-201ENST00000472460 573 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 RPS3AP14-201ENST00000483907 780 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 AC096576.1-201ENST00000489014 359 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.29□□□□□ -2.04
HOXC5Q00444 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.29□□□□□ -2.04
HOXC5Q00444 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXC5Q00444 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXC5Q00444 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms