Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 SNORD59.2-201ENST00000516873 68 ntBASIC3.11□□□□□ -1.91
CBX1P83916 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.11□□□□□ -1.91
CBX1P83916 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.11□□□□□ -1.91
CBX1P83916 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.11□□□□□ -1.91
CBX1P83916 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.11□□□□□ -1.91
CBX1P83916 SETP7-201ENST00000552169 453 ntBASIC3.11□□□□□ -1.91
CBX1P83916 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.11□□□□□ -1.91
CBX1P83916 GTF2IP8-201ENST00000560687 584 ntBASIC3.11□□□□□ -1.91
CBX1P83916 AC006116.10-201ENST00000591836 581 ntBASIC3.11□□□□□ -1.91
CBX1P83916 AC022916.3-201ENST00000592961 742 ntBASIC3.11□□□□□ -1.91
CBX1P83916 AC245036.5-201ENST00000596330 847 ntBASIC3.11□□□□□ -1.91
CBX1P83916 AL160237.3-201ENST00000604114 1013 ntBASIC3.11□□□□□ -1.91
CBX1P83916 AC067959.1-201ENST00000604334 379 ntBASIC3.11□□□□□ -1.91
CBX1P83916 AL022099.1-201ENST00000604551 712 ntBASIC3.11□□□□□ -1.91
CBX1P83916 AC009570.1-201ENST00000609599 745 ntBASIC3.11□□□□□ -1.91
CBX1P83916 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.11□□□□□ -1.91
CBX1P83916 Z99129.2-201ENST00000619967 314 ntBASIC3.11□□□□□ -1.91
CBX1P83916 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CBX1P83916 AP003485.1-201ENST00000625093 753 ntBASIC3.11□□□□□ -1.91
CBX1P83916 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CBX1P83916 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.11□□□□□ -1.91
CBX1P83916 GABRG2-229ENST00000641017 3628 ntBASIC3.11□□□□□ -1.91
CBX1P83916 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.11□□□□□ -1.91
CBX1P83916 AC090740.1-201ENST00000623193 2262 ntBASIC3.1□□□□□ -1.91
CBX1P83916 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
CBX1P83916 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CBX1P83916 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.1□□□□□ -1.91
CBX1P83916 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
CBX1P83916 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.1□□□□□ -1.91
CBX1P83916 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CBX1P83916 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.1□□□□□ -1.91
CBX1P83916 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CBX1P83916 RNU1-35P-201ENST00000362782 153 ntBASIC3.1□□□□□ -1.91
CBX1P83916 RNU5D-1-201ENST00000363299 116 ntBASIC3.1□□□□□ -1.91
CBX1P83916 RNA5SP51-201ENST00000364750 119 ntBASIC3.1□□□□□ -1.91
CBX1P83916 RNU1-64P-201ENST00000365443 163 ntBASIC3.1□□□□□ -1.91
CBX1P83916 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
CBX1P83916 Y_RNA.578-201ENST00000390903 88 ntBASIC3.1□□□□□ -1.91
CBX1P83916 AL136372.1-201ENST00000403060 228 ntBASIC3.1□□□□□ -1.91
CBX1P83916 RN7SKP202-201ENST00000410439 330 ntBASIC3.1□□□□□ -1.91
CBX1P83916 MRPL50P2-201ENST00000416821 482 ntBASIC3.1□□□□□ -1.91
CBX1P83916 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.1□□□□□ -1.91
CBX1P83916 MTATP6P4-201ENST00000427725 675 ntBASIC3.1□□□□□ -1.91
CBX1P83916 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.1□□□□□ -1.91
CBX1P83916 MTCYBP11-201ENST00000447254 1109 ntBASIC3.1□□□□□ -1.91
CBX1P83916 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.1□□□□□ -1.91
CBX1P83916 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.1□□□□□ -1.91
CBX1P83916 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.1□□□□□ -1.91
CBX1P83916 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.1□□□□□ -1.91
CBX1P83916 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.1□□□□□ -1.91
CBX1P83916 AL133271.1-201ENST00000538229 291 ntBASIC3.1□□□□□ -1.91
CBX1P83916 AC024224.1-201ENST00000538284 609 ntBASIC3.1□□□□□ -1.91
CBX1P83916 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.1□□□□□ -1.91
CBX1P83916 AC012443.1-201ENST00000605605 231 ntBASIC3.1□□□□□ -1.91
CBX1P83916 AC069200.1-201ENST00000609511 323 ntBASIC3.1□□□□□ -1.91
CBX1P83916 AC093673.2-201ENST00000609674 331 ntBASIC3.1□□□□□ -1.91
CBX1P83916 AC104237.2-201ENST00000612456 443 ntBASIC3.1□□□□□ -1.91
CBX1P83916 AC005332.6-201ENST00000613178 446 ntBASIC3.1□□□□□ -1.91
CBX1P83916 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CBX1P83916 AC090897.3-201ENST00000636973 1157 ntBASIC3.1□□□□□ -1.91
CBX1P83916 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.1□□□□□ -1.91
CBX1P83916 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CBX1P83916 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.1□□□□□ -1.91
CBX1P83916 OR4G11P-202ENST00000642116 1414 ntBASIC3.1□□□□□ -1.91
CBX1P83916 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CBX1P83916 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CBX1P83916 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CBX1P83916 CUL1P1-201ENST00000509510 2425 ntBASIC3.09□□□□□ -1.91
CBX1P83916 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CBX1P83916 DEFA7P-201ENST00000382676 285 ntBASIC3.09□□□□□ -1.91
CBX1P83916 MIR554-201ENST00000384874 96 ntBASIC3.09□□□□□ -1.91
CBX1P83916 AC007066.1-201ENST00000392902 381 ntBASIC3.09□□□□□ -1.91
CBX1P83916 PPIAP31-201ENST00000405422 495 ntBASIC3.09□□□□□ -1.91
CBX1P83916 RNA5SP181-201ENST00000410246 98 ntBASIC3.09□□□□□ -1.91
CBX1P83916 ATP5A1P2-201ENST00000412323 255 ntBASIC3.09□□□□□ -1.91
CBX1P83916 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.09□□□□□ -1.91
CBX1P83916 MTND4P3-201ENST00000417829 541 ntBASIC3.09□□□□□ -1.91
CBX1P83916 AC019178.2-201ENST00000423595 505 ntBASIC3.09□□□□□ -1.91
CBX1P83916 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CBX1P83916 USP9YP36-201ENST00000424581 829 ntBASIC3.09□□□□□ -1.91
CBX1P83916 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.09□□□□□ -1.91
CBX1P83916 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.09□□□□□ -1.91
CBX1P83916 AC092427.1-201ENST00000439177 601 ntBASIC3.09□□□□□ -1.91
CBX1P83916 AC108734.1-201ENST00000439549 399 ntBASIC3.09□□□□□ -1.91
CBX1P83916 OR6K5P-201ENST00000447050 945 ntBASIC3.09□□□□□ -1.91
CBX1P83916 RPL39P6-201ENST00000448289 150 ntBASIC3.09□□□□□ -1.91
CBX1P83916 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CBX1P83916 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.09□□□□□ -1.91
CBX1P83916 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.09□□□□□ -1.91
CBX1P83916 AC104629.1-201ENST00000494226 508 ntBASIC3.09□□□□□ -1.91
CBX1P83916 AC098799.1-201ENST00000504752 800 ntBASIC3.09□□□□□ -1.91
CBX1P83916 COX7A2P2-201ENST00000505291 250 ntBASIC3.09□□□□□ -1.91
CBX1P83916 AC002456.2-201ENST00000509356 380 ntBASIC3.09□□□□□ -1.91
CBX1P83916 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.09□□□□□ -1.91
CBX1P83916 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.09□□□□□ -1.91
CBX1P83916 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.09□□□□□ -1.91
CBX1P83916 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.09□□□□□ -1.91
CBX1P83916 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.09□□□□□ -1.91
CBX1P83916 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.09□□□□□ -1.91
CBX1P83916 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms