Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MTND4P18-201ENST00000447010 465 ntBASIC4.26□□□□□ -1.73
COPB1P53618 AC003071.1-201ENST00000451219 789 ntBASIC4.26□□□□□ -1.73
COPB1P53618 FGF7P6-202ENST00000451282 293 ntBASIC4.26□□□□□ -1.73
COPB1P53618 IFNWP4-201ENST00000453148 294 ntBASIC4.26□□□□□ -1.73
COPB1P53618 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.26□□□□□ -1.73
COPB1P53618 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.26□□□□□ -1.73
COPB1P53618 BX322784.1-201ENST00000455793 1077 ntBASIC4.26□□□□□ -1.73
COPB1P53618 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.26□□□□□ -1.73
COPB1P53618 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.26□□□□□ -1.73
COPB1P53618 AC091153.1-201ENST00000466297 402 ntBASIC4.26□□□□□ -1.73
COPB1P53618 AL136126.1-201ENST00000473603 402 ntBASIC4.26□□□□□ -1.73
COPB1P53618 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.26□□□□□ -1.73
COPB1P53618 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.26□□□□□ -1.73
COPB1P53618 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.26□□□□□ -1.73
COPB1P53618 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.26□□□□□ -1.73
COPB1P53618 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.26□□□□□ -1.73
COPB1P53618 AL161729.4-201ENST00000604650 476 ntBASIC4.26□□□□□ -1.73
COPB1P53618 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.26□□□□□ -1.73
COPB1P53618 AP002360.4-201ENST00000606980 481 ntBASIC4.26□□□□□ -1.73
COPB1P53618 AL355073.2-201ENST00000612106 557 ntBASIC4.26□□□□□ -1.73
COPB1P53618 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.26□□□□□ -1.73
COPB1P53618 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.26□□□□□ -1.73
COPB1P53618 AL445567.2-201ENST00000618935 498 ntBASIC4.26□□□□□ -1.73
COPB1P53618 AL139089.1-201ENST00000620372 975 ntBASIC4.26□□□□□ -1.73
COPB1P53618 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.26□□□□□ -1.73
COPB1P53618 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.26□□□□□ -1.73
COPB1P53618 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.26□□□□□ -1.73
COPB1P53618 OR5H6-203ENST00000642105 978 ntBASIC4.26□□□□□ -1.73
COPB1P53618 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
COPB1P53618 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COPB1P53618 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COPB1P53618 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
COPB1P53618 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
COPB1P53618 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.25□□□□□ -1.73
COPB1P53618 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
COPB1P53618 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COPB1P53618 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.25□□□□□ -1.73
COPB1P53618 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.25□□□□□ -1.73
COPB1P53618 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
COPB1P53618 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.25□□□□□ -1.73
COPB1P53618 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.25□□□□□ -1.73
COPB1P53618 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
COPB1P53618 HSPE1P8-201ENST00000406997 288 ntBASIC4.25□□□□□ -1.73
COPB1P53618 AL603766.1-201ENST00000407763 664 ntBASIC4.25□□□□□ -1.73
COPB1P53618 RNU6-628P-201ENST00000410675 107 ntBASIC4.25□□□□□ -1.73
COPB1P53618 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.25□□□□□ -1.73
COPB1P53618 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.25□□□□□ -1.73
COPB1P53618 UBE2V1P8-201ENST00000437166 265 ntBASIC4.25□□□□□ -1.73
COPB1P53618 AC105402.2-201ENST00000438503 358 ntBASIC4.25□□□□□ -1.73
COPB1P53618 MTATP6P23-201ENST00000440153 476 ntBASIC4.25□□□□□ -1.73
COPB1P53618 RPL7P36-201ENST00000444633 681 ntBASIC4.25□□□□□ -1.73
COPB1P53618 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COPB1P53618 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.25□□□□□ -1.73
COPB1P53618 MTCO1P42-201ENST00000457379 726 ntBASIC4.25□□□□□ -1.73
COPB1P53618 RPL7P19-201ENST00000469948 618 ntBASIC4.25□□□□□ -1.73
COPB1P53618 ACTR3P3-201ENST00000480448 893 ntBASIC4.25□□□□□ -1.73
COPB1P53618 HMGB1P36-201ENST00000487709 576 ntBASIC4.25□□□□□ -1.73
COPB1P53618 NDUFB4P2-201ENST00000509515 391 ntBASIC4.25□□□□□ -1.73
COPB1P53618 AC022483.1-201ENST00000514020 567 ntBASIC4.25□□□□□ -1.73
COPB1P53618 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.25□□□□□ -1.73
COPB1P53618 RNU6-1003P-201ENST00000517099 105 ntBASIC4.25□□□□□ -1.73
COPB1P53618 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
COPB1P53618 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
COPB1P53618 IGLVIV-53-201ENST00000520107 367 ntBASIC4.25□□□□□ -1.73
COPB1P53618 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.25□□□□□ -1.73
COPB1P53618 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.25□□□□□ -1.73
COPB1P53618 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.25□□□□□ -1.73
COPB1P53618 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.25□□□□□ -1.73
COPB1P53618 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.25□□□□□ -1.73
COPB1P53618 ZNF519P2-201ENST00000557032 169 ntBASIC4.25□□□□□ -1.73
COPB1P53618 AL606834.2-201ENST00000602954 668 ntBASIC4.25□□□□□ -1.73
COPB1P53618 AC080013.4-201ENST00000607624 649 ntBASIC4.25□□□□□ -1.73
COPB1P53618 OR6R2P-201ENST00000609216 300 ntBASIC4.25□□□□□ -1.73
COPB1P53618 AC090517.2-201ENST00000614966 680 ntBASIC4.25□□□□□ -1.73
COPB1P53618 AC008250.2-201ENST00000615261 205 ntBASIC4.25□□□□□ -1.73
COPB1P53618 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.25□□□□□ -1.73
COPB1P53618 AL161637.1-201ENST00000622380 412 ntBASIC4.25□□□□□ -1.73
COPB1P53618 AP006248.2-201ENST00000623309 592 ntBASIC4.25□□□□□ -1.73
COPB1P53618 AL592437.2-201ENST00000421655 2434 ntBASIC4.25□□□□□ -1.73
COPB1P53618 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COPB1P53618 SAGE4P-201ENST00000442271 3381 ntBASIC4.25□□□□□ -1.73
COPB1P53618 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.24□□□□□ -1.73
COPB1P53618 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
COPB1P53618 AP002001.2-201ENST00000529025 1469 ntBASIC4.24□□□□□ -1.73
COPB1P53618 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COPB1P53618 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COPB1P53618 AC008725.1-201ENST00000605123 2263 ntBASIC4.24□□□□□ -1.73
COPB1P53618 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COPB1P53618 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.24□□□□□ -1.73
COPB1P53618 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
COPB1P53618 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COPB1P53618 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
COPB1P53618 RNA5SP130-201ENST00000364431 114 ntBASIC4.24□□□□□ -1.73
COPB1P53618 Y_RNA.248-201ENST00000364501 109 ntBASIC4.24□□□□□ -1.73
COPB1P53618 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
COPB1P53618 MIR23A-201ENST00000385245 73 ntBASIC4.24□□□□□ -1.73
COPB1P53618 AL024474.1-201ENST00000404655 591 ntBASIC4.24□□□□□ -1.73
COPB1P53618 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.24□□□□□ -1.73
COPB1P53618 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.24□□□□□ -1.73
COPB1P53618 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms