Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC022790.1-201ENST00000522872 204 ntBASIC5.01□□□□□ -1.61
MRE11P49959 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
MRE11P49959 FAM92A1P1-201ENST00000528023 890 ntBASIC5.01□□□□□ -1.61
MRE11P49959 AC109635.3-201ENST00000529536 185 ntBASIC5.01□□□□□ -1.61
MRE11P49959 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.01□□□□□ -1.61
MRE11P49959 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.01□□□□□ -1.61
MRE11P49959 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.01□□□□□ -1.61
MRE11P49959 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.01□□□□□ -1.61
MRE11P49959 RPL21P12-201ENST00000559810 515 ntBASIC5.01□□□□□ -1.61
MRE11P49959 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.01□□□□□ -1.61
MRE11P49959 AC008752.3-201ENST00000588113 712 ntBASIC5.01□□□□□ -1.61
MRE11P49959 AC008687.2-201ENST00000597865 520 ntBASIC5.01□□□□□ -1.61
MRE11P49959 AL117336.2-201ENST00000602435 335 ntBASIC5.01□□□□□ -1.61
MRE11P49959 AC012468.1-201ENST00000604888 430 ntBASIC5.01□□□□□ -1.61
MRE11P49959 FAM27B-201ENST00000610601 213 ntBASIC5.01□□□□□ -1.61
MRE11P49959 MIR486-1-201ENST00000612171 68 ntBASIC5.01□□□□□ -1.61
MRE11P49959 AC007742.2-201ENST00000618226 398 ntBASIC5.01□□□□□ -1.61
MRE11P49959 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.01□□□□□ -1.61
MRE11P49959 AC110994.2-201ENST00000635481 492 ntBASIC5.01□□□□□ -1.61
MRE11P49959 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
MRE11P49959 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
MRE11P49959 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
MRE11P49959 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.01□□□□□ -1.61
MRE11P49959 MTND4P23-201ENST00000447723 1363 ntBASIC5.01□□□□□ -1.61
MRE11P49959 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.01□□□□□ -1.61
MRE11P49959 AC106871.1-201ENST00000568324 3102 ntBASIC5.01□□□□□ -1.61
MRE11P49959 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5□□□□□ -1.61
MRE11P49959 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MRE11P49959 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MRE11P49959 LINC00622-201ENST00000562811 1570 ntBASIC5□□□□□ -1.61
MRE11P49959 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5□□□□□ -1.61
MRE11P49959 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
MRE11P49959 AL022578.1-201ENST00000439330 1433 ntBASIC5□□□□□ -1.61
MRE11P49959 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
MRE11P49959 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
MRE11P49959 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5□□□□□ -1.61
MRE11P49959 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MRE11P49959 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
MRE11P49959 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
MRE11P49959 Y_RNA.89-201ENST00000363031 102 ntBASIC5□□□□□ -1.61
MRE11P49959 MIR200C-201ENST00000384980 68 ntBASIC5□□□□□ -1.61
MRE11P49959 MIR320C1-201ENST00000408566 88 ntBASIC5□□□□□ -1.61
MRE11P49959 RN7SKP266-201ENST00000410232 287 ntBASIC5□□□□□ -1.61
MRE11P49959 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5□□□□□ -1.61
MRE11P49959 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5□□□□□ -1.61
MRE11P49959 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5□□□□□ -1.61
MRE11P49959 SDCBPP2-201ENST00000424643 885 ntBASIC5□□□□□ -1.61
MRE11P49959 MTND1P14-201ENST00000427400 950 ntBASIC5□□□□□ -1.61
MRE11P49959 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5□□□□□ -1.61
MRE11P49959 AC010881.1-201ENST00000433830 235 ntBASIC5□□□□□ -1.61
MRE11P49959 SNRPEP7-201ENST00000438350 220 ntBASIC5□□□□□ -1.61
MRE11P49959 RPL37P3-201ENST00000456825 293 ntBASIC5□□□□□ -1.61
MRE11P49959 BTF3P5-201ENST00000457252 467 ntBASIC5□□□□□ -1.61
MRE11P49959 UBDP1-202ENST00000457888 382 ntBASIC5□□□□□ -1.61
MRE11P49959 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5□□□□□ -1.61
MRE11P49959 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5□□□□□ -1.61
MRE11P49959 AC108145.1-201ENST00000503770 153 ntBASIC5□□□□□ -1.61
MRE11P49959 AC024589.1-201ENST00000512207 263 ntBASIC5□□□□□ -1.61
MRE11P49959 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5□□□□□ -1.61
MRE11P49959 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
MRE11P49959 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5□□□□□ -1.61
MRE11P49959 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5□□□□□ -1.61
MRE11P49959 AP000790.1-201ENST00000528891 737 ntBASIC5□□□□□ -1.61
MRE11P49959 GLYCAM1-201ENST00000546596 285 ntBASIC5□□□□□ -1.61
MRE11P49959 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5□□□□□ -1.61
MRE11P49959 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5□□□□□ -1.61
MRE11P49959 AL157687.1-201ENST00000554853 619 ntBASIC5□□□□□ -1.61
MRE11P49959 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5□□□□□ -1.61
MRE11P49959 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5□□□□□ -1.61
MRE11P49959 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5□□□□□ -1.61
MRE11P49959 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5□□□□□ -1.61
MRE11P49959 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5□□□□□ -1.61
MRE11P49959 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5□□□□□ -1.61
MRE11P49959 AC115085.1-201ENST00000588924 229 ntBASIC5□□□□□ -1.61
MRE11P49959 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5□□□□□ -1.61
MRE11P49959 AC020910.3-201ENST00000603701 874 ntBASIC5□□□□□ -1.61
MRE11P49959 AL355816.1-201ENST00000607951 118 ntBASIC5□□□□□ -1.61
MRE11P49959 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5□□□□□ -1.61
MRE11P49959 AL020991.1-201ENST00000612314 373 ntBASIC5□□□□□ -1.61
MRE11P49959 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5□□□□□ -1.61
MRE11P49959 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5□□□□□ -1.61
MRE11P49959 PISRT1-201ENST00000626175 531 ntBASIC5□□□□□ -1.61
MRE11P49959 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5□□□□□ -1.61
MRE11P49959 AC074029.4-201ENST00000624796 1859 ntBASIC5□□□□□ -1.61
MRE11P49959 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.99□□□□□ -1.61
MRE11P49959 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
MRE11P49959 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
MRE11P49959 LINC02471-203ENST00000641941 4752 ntBASIC4.99□□□□□ -1.61
MRE11P49959 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MRE11P49959 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
MRE11P49959 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MRE11P49959 RNY4P34-201ENST00000364779 95 ntBASIC4.99□□□□□ -1.61
MRE11P49959 Y_RNA.295-201ENST00000364918 102 ntBASIC4.99□□□□□ -1.61
MRE11P49959 RNU6-769P-201ENST00000384407 104 ntBASIC4.99□□□□□ -1.61
MRE11P49959 RNU1-13P-201ENST00000384499 162 ntBASIC4.99□□□□□ -1.61
MRE11P49959 AL138878.1-201ENST00000405131 347 ntBASIC4.99□□□□□ -1.61
MRE11P49959 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.99□□□□□ -1.61
MRE11P49959 MIR1305-201ENST00000408300 86 ntBASIC4.99□□□□□ -1.61
MRE11P49959 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.99□□□□□ -1.61
MRE11P49959 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms