Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTCFP49711 RNA5SP189-201ENST00000364920 115 ntBASIC4.21□□□□□ -1.74
CTCFP49711 SNORA54-201ENST00000384281 123 ntBASIC4.21□□□□□ -1.74
CTCFP49711 RAP1BP1-201ENST00000412709 553 ntBASIC4.21□□□□□ -1.74
CTCFP49711 AL365396.1-201ENST00000430854 671 ntBASIC4.21□□□□□ -1.74
CTCFP49711 AC011742.1-201ENST00000431448 434 ntBASIC4.21□□□□□ -1.74
CTCFP49711 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.21□□□□□ -1.74
CTCFP49711 RPL31P50-201ENST00000471002 296 ntBASIC4.21□□□□□ -1.74
CTCFP49711 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.21□□□□□ -1.74
CTCFP49711 RPL31P13-201ENST00000484151 370 ntBASIC4.21□□□□□ -1.74
CTCFP49711 AC069499.1-201ENST00000489433 509 ntBASIC4.21□□□□□ -1.74
CTCFP49711 RPL31P61-201ENST00000496160 376 ntBASIC4.21□□□□□ -1.74
CTCFP49711 AC093663.1-201ENST00000497190 394 ntBASIC4.21□□□□□ -1.74
CTCFP49711 AC147055.4-201ENST00000504399 745 ntBASIC4.21□□□□□ -1.74
CTCFP49711 AC093767.1-201ENST00000504523 156 ntBASIC4.21□□□□□ -1.74
CTCFP49711 NDUFB4P9-201ENST00000511646 388 ntBASIC4.21□□□□□ -1.74
CTCFP49711 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.21□□□□□ -1.74
CTCFP49711 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.21□□□□□ -1.74
CTCFP49711 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.21□□□□□ -1.74
CTCFP49711 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.21□□□□□ -1.74
CTCFP49711 HSPE1P3-201ENST00000559254 309 ntBASIC4.21□□□□□ -1.74
CTCFP49711 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.21□□□□□ -1.74
CTCFP49711 MIR4435-1-201ENST00000582552 80 ntBASIC4.21□□□□□ -1.74
CTCFP49711 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.21□□□□□ -1.74
CTCFP49711 AC021171.1-201ENST00000603137 706 ntBASIC4.21□□□□□ -1.74
CTCFP49711 AC073657.2-201ENST00000605661 303 ntBASIC4.21□□□□□ -1.74
CTCFP49711 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.21□□□□□ -1.74
CTCFP49711 AC079416.3-201ENST00000624479 549 ntBASIC4.21□□□□□ -1.74
CTCFP49711 AP000526.1-201ENST00000603308 1388 ntBASIC4.21□□□□□ -1.74
CTCFP49711 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
CTCFP49711 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.21□□□□□ -1.74
CTCFP49711 OTUD4P1-201ENST00000237841 3067 ntBASIC4.21□□□□□ -1.74
CTCFP49711 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CTCFP49711 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.21□□□□□ -1.74
CTCFP49711 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CTCFP49711 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.21□□□□□ -1.74
CTCFP49711 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTCFP49711 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.21□□□□□ -1.74
CTCFP49711 OR5BR1P-201ENST00000524992 1330 ntBASIC4.21□□□□□ -1.74
CTCFP49711 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CTCFP49711 SGO1P2-201ENST00000429458 1589 ntBASIC4.2□□□□□ -1.74
CTCFP49711 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.2□□□□□ -1.74
CTCFP49711 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.2□□□□□ -1.74
CTCFP49711 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.2□□□□□ -1.74
CTCFP49711 RNU6-339P-201ENST00000384310 107 ntBASIC4.2□□□□□ -1.74
CTCFP49711 SNORA44-201ENST00000384584 132 ntBASIC4.2□□□□□ -1.74
CTCFP49711 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.2□□□□□ -1.74
CTCFP49711 BX323014.1-201ENST00000412876 237 ntBASIC4.2□□□□□ -1.74
CTCFP49711 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.2□□□□□ -1.74
CTCFP49711 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.2□□□□□ -1.74
CTCFP49711 AL159169.1-201ENST00000421119 127 ntBASIC4.2□□□□□ -1.74
CTCFP49711 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.2□□□□□ -1.74
CTCFP49711 AL138799.3-201ENST00000438968 350 ntBASIC4.2□□□□□ -1.74
CTCFP49711 AL606662.1-201ENST00000445763 553 ntBASIC4.2□□□□□ -1.74
CTCFP49711 AL109741.2-201ENST00000455561 343 ntBASIC4.2□□□□□ -1.74
CTCFP49711 AC026410.2-201ENST00000460281 156 ntBASIC4.2□□□□□ -1.74
CTCFP49711 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CTCFP49711 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.2□□□□□ -1.74
CTCFP49711 HSPE1P23-201ENST00000509838 286 ntBASIC4.2□□□□□ -1.74
CTCFP49711 XKRY-201ENST00000510392 1100 ntBASIC4.2□□□□□ -1.74
CTCFP49711 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.2□□□□□ -1.74
CTCFP49711 DEFB131D-201ENST00000526803 184 ntBASIC4.2□□□□□ -1.74
CTCFP49711 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.2□□□□□ -1.74
CTCFP49711 MIR4999-201ENST00000585029 91 ntBASIC4.2□□□□□ -1.74
CTCFP49711 BNIP3P24-201ENST00000593398 557 ntBASIC4.2□□□□□ -1.74
CTCFP49711 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.2□□□□□ -1.74
CTCFP49711 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.2□□□□□ -1.74
CTCFP49711 AC103710.3-201ENST00000608157 948 ntBASIC4.2□□□□□ -1.74
CTCFP49711 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CTCFP49711 Z99129.2-201ENST00000619967 314 ntBASIC4.2□□□□□ -1.74
CTCFP49711 AC131159.1-201ENST00000621854 213 ntBASIC4.2□□□□□ -1.74
CTCFP49711 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.2□□□□□ -1.74
CTCFP49711 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.2□□□□□ -1.74
CTCFP49711 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
CTCFP49711 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CTCFP49711 GDI2P1-201ENST00000429312 1336 ntBASIC4.2□□□□□ -1.74
CTCFP49711 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTCFP49711 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CTCFP49711 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTCFP49711 SNORA4.1-201ENST00000364263 144 ntBASIC4.19□□□□□ -1.74
CTCFP49711 SNORD6-201ENST00000365444 73 ntBASIC4.19□□□□□ -1.74
CTCFP49711 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTCFP49711 SNORD17-201ENST00000390930 237 ntBASIC4.19□□□□□ -1.74
CTCFP49711 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CTCFP49711 AL138885.1-201ENST00000405921 675 ntBASIC4.19□□□□□ -1.74
CTCFP49711 PIGPP2-201ENST00000411569 458 ntBASIC4.19□□□□□ -1.74
CTCFP49711 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.19□□□□□ -1.74
CTCFP49711 MTCYBP38-201ENST00000417160 1123 ntBASIC4.19□□□□□ -1.74
CTCFP49711 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.19□□□□□ -1.74
CTCFP49711 AC245054.1-201ENST00000420944 258 ntBASIC4.19□□□□□ -1.74
CTCFP49711 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.19□□□□□ -1.74
CTCFP49711 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CTCFP49711 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CTCFP49711 SETP5-201ENST00000437270 562 ntBASIC4.19□□□□□ -1.74
CTCFP49711 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.19□□□□□ -1.74
CTCFP49711 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.19□□□□□ -1.74
CTCFP49711 USP9YP34-201ENST00000453983 808 ntBASIC4.19□□□□□ -1.74
CTCFP49711 CFTRP1-201ENST00000456646 183 ntBASIC4.19□□□□□ -1.74
CTCFP49711 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.19□□□□□ -1.74
CTCFP49711 NCOR1P1-202ENST00000486162 291 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms