Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RPL28P46779 AC073325.2-201ENST00000339545 159 ntBASIC1.89□□□□□ -2.11
RPL28P46779 SNORA25.6-201ENST00000364121 118 ntBASIC1.89□□□□□ -2.11
RPL28P46779 SNORD56.5-201ENST00000364281 72 ntBASIC1.89□□□□□ -2.11
RPL28P46779 RNU1-109P-201ENST00000383960 147 ntBASIC1.89□□□□□ -2.11
RPL28P46779 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
RPL28P46779 AL512633.1-201ENST00000399931 655 ntBASIC1.89□□□□□ -2.11
RPL28P46779 AL024474.1-201ENST00000404655 591 ntBASIC1.89□□□□□ -2.11
RPL28P46779 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.89□□□□□ -2.11
RPL28P46779 AL513175.2-201ENST00000422071 443 ntBASIC1.89□□□□□ -2.11
RPL28P46779 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.89□□□□□ -2.11
RPL28P46779 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
RPL28P46779 RNFT1P2-201ENST00000443064 757 ntBASIC1.89□□□□□ -2.11
RPL28P46779 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.89□□□□□ -2.11
RPL28P46779 AC016696.1-201ENST00000446949 318 ntBASIC1.89□□□□□ -2.11
RPL28P46779 AL589880.1-201ENST00000448271 287 ntBASIC1.89□□□□□ -2.11
RPL28P46779 AC104978.1-201ENST00000449387 391 ntBASIC1.89□□□□□ -2.11
RPL28P46779 RPL27AP5-201ENST00000469428 449 ntBASIC1.89□□□□□ -2.11
RPL28P46779 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RPL28P46779 PRELID3BP6-201ENST00000503839 571 ntBASIC1.89□□□□□ -2.11
RPL28P46779 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.89□□□□□ -2.11
RPL28P46779 AC011352.3-201ENST00000505162 593 ntBASIC1.89□□□□□ -2.11
RPL28P46779 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RPL28P46779 AC006445.2-201ENST00000510061 472 ntBASIC1.89□□□□□ -2.11
RPL28P46779 SNORA26.10-201ENST00000516427 141 ntBASIC1.89□□□□□ -2.11
RPL28P46779 SNORA31.15-201ENST00000516771 132 ntBASIC1.89□□□□□ -2.11
RPL28P46779 HMGB1P41-201ENST00000520234 440 ntBASIC1.89□□□□□ -2.11
RPL28P46779 ARL2BPP5-201ENST00000523141 481 ntBASIC1.89□□□□□ -2.11
RPL28P46779 AP002404.1-201ENST00000532005 451 ntBASIC1.89□□□□□ -2.11
RPL28P46779 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RPL28P46779 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.89□□□□□ -2.11
RPL28P46779 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.89□□□□□ -2.11
RPL28P46779 H3F3AP1-201ENST00000559984 334 ntBASIC1.89□□□□□ -2.11
RPL28P46779 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC1.89□□□□□ -2.11
RPL28P46779 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC1.89□□□□□ -2.11
RPL28P46779 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC1.89□□□□□ -2.11
RPL28P46779 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.89□□□□□ -2.11
RPL28P46779 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC1.89□□□□□ -2.11
RPL28P46779 RPL23AP78-201ENST00000599928 470 ntBASIC1.89□□□□□ -2.11
RPL28P46779 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC1.89□□□□□ -2.11
RPL28P46779 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RPL28P46779 AC069200.1-201ENST00000609511 323 ntBASIC1.89□□□□□ -2.11
RPL28P46779 AC010297.1-201ENST00000623948 149 ntBASIC1.89□□□□□ -2.11
RPL28P46779 AC110079.1-202ENST00000635213 138 ntBASIC1.89□□□□□ -2.11
RPL28P46779 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.89□□□□□ -2.11
RPL28P46779 ABBA01000935.2-201ENST00000637477 838 ntBASIC1.89□□□□□ -2.11
RPL28P46779 AC008432.1-201ENST00000615912 1320 ntBASIC1.89□□□□□ -2.11
RPL28P46779 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.88□□□□□ -2.11
RPL28P46779 ZNF519P1-201ENST00000449011 1626 ntBASIC1.88□□□□□ -2.11
RPL28P46779 AC000403.1-201ENST00000613696 3585 ntBASIC1.88□□□□□ -2.11
RPL28P46779 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RPL28P46779 MIR6073-201ENST00000352083 89 ntBASIC1.88□□□□□ -2.11
RPL28P46779 MIR22-201ENST00000362190 85 ntBASIC1.88□□□□□ -2.11
RPL28P46779 SNORA63.1-201ENST00000362493 131 ntBASIC1.88□□□□□ -2.11
RPL28P46779 RNU6-1155P-201ENST00000363554 107 ntBASIC1.88□□□□□ -2.11
RPL28P46779 RNU6-115P-201ENST00000364310 107 ntBASIC1.88□□□□□ -2.11
RPL28P46779 RNA5-8SP4-201ENST00000365096 150 ntBASIC1.88□□□□□ -2.11
RPL28P46779 DEFA7P-201ENST00000382676 285 ntBASIC1.88□□□□□ -2.11
RPL28P46779 SNORD51-201ENST00000384320 80 ntBASIC1.88□□□□□ -2.11
RPL28P46779 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.88□□□□□ -2.11
RPL28P46779 KRR1P1-201ENST00000419430 803 ntBASIC1.88□□□□□ -2.11
RPL28P46779 RPL7P37-201ENST00000425095 738 ntBASIC1.88□□□□□ -2.11
RPL28P46779 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC1.88□□□□□ -2.11
RPL28P46779 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.88□□□□□ -2.11
RPL28P46779 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC1.88□□□□□ -2.11
RPL28P46779 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.88□□□□□ -2.11
RPL28P46779 NAP1L1P3-201ENST00000462291 880 ntBASIC1.88□□□□□ -2.11
RPL28P46779 AC091153.1-201ENST00000466297 402 ntBASIC1.88□□□□□ -2.11
RPL28P46779 RPS3AP43-201ENST00000479743 781 ntBASIC1.88□□□□□ -2.11
RPL28P46779 CAB39P1-201ENST00000502277 460 ntBASIC1.88□□□□□ -2.11
RPL28P46779 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RPL28P46779 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC1.88□□□□□ -2.11
RPL28P46779 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.88□□□□□ -2.11
RPL28P46779 SEM1P1-201ENST00000506694 209 ntBASIC1.88□□□□□ -2.11
RPL28P46779 RNU6-751P-201ENST00000516382 101 ntBASIC1.88□□□□□ -2.11
RPL28P46779 SCARNA13-201ENST00000516672 275 ntBASIC1.88□□□□□ -2.11
RPL28P46779 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.88□□□□□ -2.11
RPL28P46779 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.88□□□□□ -2.11
RPL28P46779 AC128657.1-201ENST00000549459 145 ntBASIC1.88□□□□□ -2.11
RPL28P46779 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.88□□□□□ -2.11
RPL28P46779 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.88□□□□□ -2.11
RPL28P46779 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC1.88□□□□□ -2.11
RPL28P46779 AC090695.1-201ENST00000561269 1222 ntBASIC1.88□□□□□ -2.11
RPL28P46779 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.88□□□□□ -2.11
RPL28P46779 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
RPL28P46779 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC1.88□□□□□ -2.11
RPL28P46779 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC1.88□□□□□ -2.11
RPL28P46779 MIR5004-201ENST00000579078 107 ntBASIC1.88□□□□□ -2.11
RPL28P46779 MIR4444-1-201ENST00000581696 74 ntBASIC1.88□□□□□ -2.11
RPL28P46779 MIR3609-201ENST00000582661 80 ntBASIC1.88□□□□□ -2.11
RPL28P46779 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.88□□□□□ -2.11
RPL28P46779 MIR4444-2-201ENST00000584390 74 ntBASIC1.88□□□□□ -2.11
RPL28P46779 AC008739.2-201ENST00000597006 317 ntBASIC1.88□□□□□ -2.11
RPL28P46779 AC133794.1-201ENST00000602731 914 ntBASIC1.88□□□□□ -2.11
RPL28P46779 BX664608.1-201ENST00000610519 487 ntBASIC1.88□□□□□ -2.11
RPL28P46779 AL162274.2-201ENST00000614406 332 ntBASIC1.88□□□□□ -2.11
RPL28P46779 CYCSP41-201ENST00000616920 296 ntBASIC1.88□□□□□ -2.11
RPL28P46779 SNHG22-203ENST00000617833 660 ntBASIC1.88□□□□□ -2.11
RPL28P46779 AL355493.4-201ENST00000618530 292 ntBASIC1.88□□□□□ -2.11
RPL28P46779 AC091953.5-201ENST00000622919 233 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms