Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC093591.3-201ENST00000634516 308 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.27□□□□□ -1.89
NKX2-1P43699 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NKX2-1P43699 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NKX2-1P43699 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
NKX2-1P43699 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.27□□□□□ -1.89
NKX2-1P43699 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
NKX2-1P43699 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.27□□□□□ -1.89
NKX2-1P43699 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NKX2-1P43699 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NKX2-1P43699 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NKX2-1P43699 AC116667.1-201ENST00000604855 2072 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 RPS4XP5-202ENST00000449995 1334 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NKX2-1P43699 CCT4P2-201ENST00000233836 1548 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 MTCO1P9-201ENST00000505577 1534 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NKX2-1P43699 Y_RNA.505-201ENST00000384489 102 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 MIR135A2-201ENST00000384854 100 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 RNU6-882P-201ENST00000391025 103 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 RNU11-4P-201ENST00000391149 133 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 HLFP1-201ENST00000402375 499 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 RNU2-43P-201ENST00000410306 190 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 AL663109.1-201ENST00000411498 844 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 RPL23AP26-201ENST00000412728 464 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.26□□□□□ -1.89
NKX2-1P43699 MTCO3P41-201ENST00000414801 328 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 BX890604.2-201ENST00000427883 474 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 AC091862.1-201ENST00000438016 1100 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 CYCSP43-201ENST00000438233 310 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 HMGB1P37-201ENST00000439613 609 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 PGBD4P3-201ENST00000440731 581 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.26□□□□□ -1.89
NKX2-1P43699 USP9YP29-201ENST00000445112 563 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.26□□□□□ -1.89
NKX2-1P43699 AP1S2P1-201ENST00000457344 379 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 RPS29P22-201ENST00000472363 168 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 LARP1BP2-201ENST00000486594 519 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 AC068724.1-201ENST00000487100 792 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 AC013356.1-201ENST00000489027 564 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.26□□□□□ -1.89
NKX2-1P43699 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.26□□□□□ -1.89
NKX2-1P43699 AC111000.3-201ENST00000508057 576 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.26□□□□□ -1.89
NKX2-1P43699 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.26□□□□□ -1.89
NKX2-1P43699 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.26□□□□□ -1.89
NKX2-1P43699 AC022447.1-201ENST00000515358 464 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 RN7SKP244-201ENST00000516513 307 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 RNA5SP468-201ENST00000516782 93 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 IGLVIV-65-201ENST00000517313 360 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.26□□□□□ -1.89
NKX2-1P43699 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.26□□□□□ -1.89
NKX2-1P43699 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.26□□□□□ -1.89
NKX2-1P43699 ZNF192P1-203ENST00000565888 810 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 AC099489.2-201ENST00000574976 260 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 AC025627.2-201ENST00000576220 160 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.26□□□□□ -1.89
NKX2-1P43699 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.26□□□□□ -1.89
NKX2-1P43699 AC079089.3-201ENST00000603094 673 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 U73023.1-201ENST00000603134 700 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 AC109347.2-201ENST00000610220 349 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 AC104010.1-201ENST00000616889 150 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 AC009268.2-201ENST00000621925 457 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 AL359740.1-201ENST00000624340 592 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.26□□□□□ -1.89
NKX2-1P43699 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NKX2-1P43699 AC066616.2-201ENST00000559334 1481 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
NKX2-1P43699 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NKX2-1P43699 HSPA8P1-201ENST00000425843 1833 ntBASIC3.26□□□□□ -1.89
NKX2-1P43699 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NKX2-1P43699 GABPAP-201ENST00000419271 1356 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.25□□□□□ -1.89
NKX2-1P43699 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
NKX2-1P43699 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NKX2-1P43699 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
NKX2-1P43699 SNORA60-201ENST00000362396 134 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 RNU6-853P-201ENST00000364306 107 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
NKX2-1P43699 RNU6-1119P-201ENST00000384349 108 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 HSPE1P8-201ENST00000406997 288 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 Y_RNA.608-201ENST00000410647 95 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 RPL37P18-201ENST00000411602 243 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.25□□□□□ -1.89
NKX2-1P43699 RPL7AP73-201ENST00000413490 353 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 ZNF885P-201ENST00000420174 1098 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 MTCO2P34-201ENST00000421994 607 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 RPL23AP1-201ENST00000428990 471 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 AL358472.1-201ENST00000431295 329 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-1P43699 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.25□□□□□ -1.89
NKX2-1P43699 MTND1P34-201ENST00000438556 671 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 RPL7P36-201ENST00000444633 681 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 GDI2P2-201ENST00000445131 608 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 AC239367.2-201ENST00000447309 705 ntBASIC3.25□□□□□ -1.89
NKX2-1P43699 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-1P43699 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.25□□□□□ -1.89
NKX2-1P43699 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms