Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AL354766.1-201ENST00000423396 542 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 RPL12P17-201ENST00000432393 498 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 MRPS18BP2-201ENST00000434310 759 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.42□□□□□ -1.54
CHRNA4P43681 AC074198.2-201ENST00000508153 258 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 RPS27AP18-201ENST00000515536 459 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 RNU6-62P-201ENST00000516526 102 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 HMGN1P28-201ENST00000521340 364 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.42□□□□□ -1.54
CHRNA4P43681 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.42□□□□□ -1.54
CHRNA4P43681 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.42□□□□□ -1.54
CHRNA4P43681 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.42□□□□□ -1.54
CHRNA4P43681 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.42□□□□□ -1.54
CHRNA4P43681 MIR7853-201ENST00000584820 132 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 AC064801.1-201ENST00000612025 407 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 AL161423.1-201ENST00000613700 262 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 AC018445.2-201ENST00000622987 260 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 AC073869.10-201ENST00000642016 354 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CHRNA4P43681 CASC19-284ENST00000642142 1868 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA4P43681 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CHRNA4P43681 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA4P43681 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA4P43681 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CHRNA4P43681 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA4P43681 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.42□□□□□ -1.54
CHRNA4P43681 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CHRNA4P43681 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA4P43681 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA4P43681 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA4P43681 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA4P43681 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA4P43681 RBPJP2-201ENST00000618187 1444 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CHRNA4P43681 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA4P43681 MIR411-201ENST00000362239 96 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 Y_RNA.54-201ENST00000362766 105 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 RNU4-7P-201ENST00000364758 141 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.41□□□□□ -1.54
CHRNA4P43681 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.41□□□□□ -1.54
CHRNA4P43681 RPL7P46-201ENST00000425129 740 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 RPL29P29-201ENST00000448725 423 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 RPS15AP27-201ENST00000449183 343 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 CBX1P2-201ENST00000453841 458 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.41□□□□□ -1.54
CHRNA4P43681 FTH1P2-201ENST00000466086 412 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 RN7SL174P-201ENST00000475578 289 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 RN7SL809P-201ENST00000482040 297 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 AC026801.1-201ENST00000497178 464 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 AC008716.1-201ENST00000511084 513 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 RNU6-1069P-201ENST00000516612 133 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 AC027308.1-201ENST00000517993 110 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 DYNLL1P4-201ENST00000549314 266 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 AC090115.3-201ENST00000553218 849 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.41□□□□□ -1.54
CHRNA4P43681 RN7SL356P-201ENST00000582228 248 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 SNORD39.3-201ENST00000584451 71 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.41□□□□□ -1.54
CHRNA4P43681 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.41□□□□□ -1.54
CHRNA4P43681 AL450472.1-202ENST00000637286 180 ntBASIC5.41□□□□□ -1.54
CHRNA4P43681 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA4P43681 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA4P43681 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CHRNA4P43681 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA4P43681 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.41□□□□□ -1.54
CHRNA4P43681 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.41□□□□□ -1.54
CHRNA4P43681 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA4P43681 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.41□□□□□ -1.54
CHRNA4P43681 GVINP1-202ENST00000531871 7271 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA4P43681 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.4□□□□□ -1.54
CHRNA4P43681 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA4P43681 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA4P43681 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA4P43681 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.4□□□□□ -1.54
CHRNA4P43681 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.4□□□□□ -1.54
CHRNA4P43681 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA4P43681 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA4P43681 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA4P43681 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA4P43681 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CHRNA4P43681 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CHRNA4P43681 RN7SKP115-201ENST00000363177 317 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 RNU6-1059P-201ENST00000363752 98 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 SNORA51.11-201ENST00000384442 131 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 AL138885.1-201ENST00000405921 675 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 RNU6-121P-201ENST00000410525 99 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 RNU2-6P-201ENST00000411404 190 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.4□□□□□ -1.54
CHRNA4P43681 BX682237.1-201ENST00000415016 335 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 COX6CP10-201ENST00000416832 224 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.4□□□□□ -1.54
CHRNA4P43681 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA4P43681 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNA4P43681 RPL21P112-201ENST00000434403 463 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 CYCSP6-201ENST00000434498 302 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 RPL23AP74-201ENST00000437246 471 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 CYCSP12-201ENST00000437729 300 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 AL035551.1-201ENST00000446931 348 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms