Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC103706.2-201ENST00000638080 240 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
HNF4AP41235 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.58□□□□□ -1.84
HNF4AP41235 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HNF4AP41235 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HNF4AP41235 AP000776.1-201ENST00000530032 1663 ntBASIC3.58□□□□□ -1.84
HNF4AP41235 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HNF4AP41235 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HNF4AP41235 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.57□□□□□ -1.84
HNF4AP41235 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HNF4AP41235 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HNF4AP41235 RNU1-64P-201ENST00000365443 163 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
HNF4AP41235 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HNF4AP41235 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.57□□□□□ -1.84
HNF4AP41235 RNU4-72P-201ENST00000410754 173 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 SNORA57.3-201ENST00000411095 141 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.57□□□□□ -1.84
HNF4AP41235 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HNF4AP41235 BEND7P1-201ENST00000422058 457 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HNF4AP41235 RPL27AP8-201ENST00000424277 446 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.57□□□□□ -1.84
HNF4AP41235 AL590233.1-201ENST00000430017 456 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.57□□□□□ -1.84
HNF4AP41235 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.57□□□□□ -1.84
HNF4AP41235 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.57□□□□□ -1.84
HNF4AP41235 UBE2D3P1-201ENST00000436669 444 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 AL445567.1-201ENST00000439121 144 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 MTND2P20-201ENST00000440805 661 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HNF4AP41235 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.57□□□□□ -1.84
HNF4AP41235 AC005297.2-201ENST00000450430 606 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 RPL21P134-201ENST00000453468 483 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 ANKRD26P4-201ENST00000455755 950 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 AP001992.1-205ENST00000462248 379 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 RPL23AP14-201ENST00000468281 468 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 AC090453.1-201ENST00000495560 436 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 SNORA31.1-201ENST00000515993 133 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 SNORA31.5-201ENST00000516190 133 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.57□□□□□ -1.84
HNF4AP41235 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HNF4AP41235 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.57□□□□□ -1.84
HNF4AP41235 FAM60DP-201ENST00000524174 632 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 AC008489.1-201ENST00000524271 483 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.57□□□□□ -1.84
HNF4AP41235 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.57□□□□□ -1.84
HNF4AP41235 BNIP3P5-201ENST00000562290 498 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 AC109446.2-201ENST00000567872 497 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.57□□□□□ -1.84
HNF4AP41235 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.57□□□□□ -1.84
HNF4AP41235 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.57□□□□□ -1.84
HNF4AP41235 MIR5187-201ENST00000583479 76 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 AP002907.1-201ENST00000606361 1430 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 AL451074.6-201ENST00000608512 729 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 AP002826.1-201ENST00000608835 315 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 TUG1_1.1-201ENST00000610654 145 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 AC025588.4-201ENST00000615802 908 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 AC110774.1-201ENST00000623567 2018 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.57□□□□□ -1.84
HNF4AP41235 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.57□□□□□ -1.84
HNF4AP41235 AP000553.6-201ENST00000641242 118 ntBASIC3.57□□□□□ -1.84
HNF4AP41235 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HNF4AP41235 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.56□□□□□ -1.84
HNF4AP41235 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HNF4AP41235 ZNF542P-204ENST00000482727 1305 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 AC109315.1-201ENST00000584143 1347 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HNF4AP41235 RNU6-1122P-201ENST00000384449 107 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 MIR493-201ENST00000385254 89 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.56□□□□□ -1.84
HNF4AP41235 RPL7P60-201ENST00000397636 735 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 RPS4XP3-201ENST00000398541 413 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.56□□□□□ -1.84
HNF4AP41235 CYCSP19-201ENST00000411715 316 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 AL593851.1-201ENST00000426171 157 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 AC006989.1-201ENST00000427212 131 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 RPL21P40-201ENST00000428586 483 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 MTND3P1-201ENST00000441336 220 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 MTND5P2-201ENST00000442927 1142 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 RAC1P7-201ENST00000445367 377 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HNF4AP41235 UBDP1-202ENST00000457888 382 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.56□□□□□ -1.84
HNF4AP41235 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.56□□□□□ -1.84
HNF4AP41235 RPL30P14-201ENST00000482744 348 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 AC023424.2-201ENST00000493479 777 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.56□□□□□ -1.84
HNF4AP41235 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.56□□□□□ -1.84
HNF4AP41235 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.56□□□□□ -1.84
HNF4AP41235 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.56□□□□□ -1.84
HNF4AP41235 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.56□□□□□ -1.84
HNF4AP41235 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.56□□□□□ -1.84
HNF4AP41235 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.56□□□□□ -1.84
HNF4AP41235 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.56□□□□□ -1.84
HNF4AP41235 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.56□□□□□ -1.84
HNF4AP41235 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.56□□□□□ -1.84
HNF4AP41235 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.56□□□□□ -1.84
HNF4AP41235 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms