Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.53□□□□□ -1.68
COL15A1P39059 MTND4P16-201ENST00000466108 1367 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL15A1P39059 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL15A1P39059 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL15A1P39059 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL15A1P39059 Z73965.1-201ENST00000623412 2297 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL15A1P39059 RNU6-433P-201ENST00000363216 104 ntBASIC4.53□□□□□ -1.69
COL15A1P39059 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.53□□□□□ -1.69
COL15A1P39059 RPS3AP9-201ENST00000417027 792 ntBASIC4.53□□□□□ -1.69
COL15A1P39059 AC006366.1-201ENST00000422002 759 ntBASIC4.53□□□□□ -1.69
COL15A1P39059 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.53□□□□□ -1.69
COL15A1P39059 LARP1BP3-201ENST00000437229 869 ntBASIC4.53□□□□□ -1.69
COL15A1P39059 SNRPEP7-201ENST00000438350 220 ntBASIC4.53□□□□□ -1.69
COL15A1P39059 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.53□□□□□ -1.69
COL15A1P39059 BMI1P1-201ENST00000445879 941 ntBASIC4.53□□□□□ -1.69
COL15A1P39059 COX6CP12-201ENST00000446748 202 ntBASIC4.53□□□□□ -1.69
COL15A1P39059 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
COL15A1P39059 TRBV26-201ENST00000456572 344 ntBASIC4.53□□□□□ -1.69
COL15A1P39059 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.53□□□□□ -1.69
COL15A1P39059 AC006499.2-201ENST00000513470 337 ntBASIC4.53□□□□□ -1.69
COL15A1P39059 AC010342.1-201ENST00000514047 877 ntBASIC4.53□□□□□ -1.69
COL15A1P39059 AP003033.1-201ENST00000527244 415 ntBASIC4.53□□□□□ -1.69
COL15A1P39059 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.53□□□□□ -1.69
COL15A1P39059 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.53□□□□□ -1.69
COL15A1P39059 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.53□□□□□ -1.69
COL15A1P39059 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.53□□□□□ -1.69
COL15A1P39059 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.53□□□□□ -1.69
COL15A1P39059 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.53□□□□□ -1.69
COL15A1P39059 AC008121.2-201ENST00000614647 523 ntBASIC4.53□□□□□ -1.69
COL15A1P39059 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.53□□□□□ -1.69
COL15A1P39059 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.53□□□□□ -1.69
COL15A1P39059 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.53□□□□□ -1.69
COL15A1P39059 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL15A1P39059 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL15A1P39059 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.52□□□□□ -1.69
COL15A1P39059 OR4G11P-202ENST00000642116 1414 ntBASIC4.52□□□□□ -1.69
COL15A1P39059 SNORA38.1-201ENST00000364172 131 ntBASIC4.52□□□□□ -1.69
COL15A1P39059 RNU4-75P-201ENST00000364621 146 ntBASIC4.52□□□□□ -1.69
COL15A1P39059 SSXP10-201ENST00000402595 565 ntBASIC4.52□□□□□ -1.69
COL15A1P39059 RN7SKP111-201ENST00000410349 271 ntBASIC4.52□□□□□ -1.69
COL15A1P39059 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.52□□□□□ -1.69
COL15A1P39059 AC004022.2-201ENST00000413824 193 ntBASIC4.52□□□□□ -1.69
COL15A1P39059 NUP35P2-201ENST00000416748 943 ntBASIC4.52□□□□□ -1.69
COL15A1P39059 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.52□□□□□ -1.69
COL15A1P39059 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.52□□□□□ -1.69
COL15A1P39059 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.52□□□□□ -1.69
COL15A1P39059 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.52□□□□□ -1.69
COL15A1P39059 RPS15AP17-201ENST00000470598 390 ntBASIC4.52□□□□□ -1.69
COL15A1P39059 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.52□□□□□ -1.69
COL15A1P39059 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.52□□□□□ -1.69
COL15A1P39059 AC116347.2-201ENST00000514912 523 ntBASIC4.52□□□□□ -1.69
COL15A1P39059 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.52□□□□□ -1.69
COL15A1P39059 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.52□□□□□ -1.69
COL15A1P39059 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.52□□□□□ -1.69
COL15A1P39059 AC136618.2-201ENST00000575091 400 ntBASIC4.52□□□□□ -1.69
COL15A1P39059 MAGOH2P-202ENST00000584384 429 ntBASIC4.52□□□□□ -1.69
COL15A1P39059 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.52□□□□□ -1.69
COL15A1P39059 KLKP1-201ENST00000595979 403 ntBASIC4.52□□□□□ -1.69
COL15A1P39059 AC068790.6-201ENST00000602558 258 ntBASIC4.52□□□□□ -1.69
COL15A1P39059 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.52□□□□□ -1.69
COL15A1P39059 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.52□□□□□ -1.69
COL15A1P39059 AC084035.1-201ENST00000634543 607 ntBASIC4.52□□□□□ -1.69
COL15A1P39059 U6.101-201ENST00000637707 76 ntBASIC4.52□□□□□ -1.69
COL15A1P39059 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL15A1P39059 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL15A1P39059 AC092104.1-201ENST00000497346 1441 ntBASIC4.51□□□□□ -1.69
COL15A1P39059 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL15A1P39059 NEAT1-202ENST00000501122 22743 ntBASIC4.51□□□□□ -1.69
COL15A1P39059 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL15A1P39059 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.51□□□□□ -1.69
COL15A1P39059 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL15A1P39059 EIF5P1-201ENST00000400019 1231 ntBASIC4.51□□□□□ -1.69
COL15A1P39059 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.51□□□□□ -1.69
COL15A1P39059 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.51□□□□□ -1.69
COL15A1P39059 AL365184.2-201ENST00000431139 435 ntBASIC4.51□□□□□ -1.69
COL15A1P39059 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.51□□□□□ -1.69
COL15A1P39059 EPS15P1-201ENST00000448836 336 ntBASIC4.51□□□□□ -1.69
COL15A1P39059 AL162388.1-201ENST00000450912 352 ntBASIC4.51□□□□□ -1.69
COL15A1P39059 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.51□□□□□ -1.69
COL15A1P39059 CFTRP1-201ENST00000456646 183 ntBASIC4.51□□□□□ -1.69
COL15A1P39059 U3.44-201ENST00000458938 192 ntBASIC4.51□□□□□ -1.69
COL15A1P39059 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.51□□□□□ -1.69
COL15A1P39059 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.51□□□□□ -1.69
COL15A1P39059 RN7SKP82-201ENST00000516786 223 ntBASIC4.51□□□□□ -1.69
COL15A1P39059 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.51□□□□□ -1.69
COL15A1P39059 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.51□□□□□ -1.69
COL15A1P39059 AP006245.1-201ENST00000522549 120 ntBASIC4.51□□□□□ -1.69
COL15A1P39059 OR4A45P-201ENST00000529954 901 ntBASIC4.51□□□□□ -1.69
COL15A1P39059 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.51□□□□□ -1.69
COL15A1P39059 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.51□□□□□ -1.69
COL15A1P39059 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.51□□□□□ -1.69
COL15A1P39059 AC104073.3-201ENST00000610942 955 ntBASIC4.51□□□□□ -1.69
COL15A1P39059 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.51□□□□□ -1.69
COL15A1P39059 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.51□□□□□ -1.69
COL15A1P39059 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL15A1P39059 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.51□□□□□ -1.69
COL15A1P39059 AP002907.1-201ENST00000606361 1430 ntBASIC4.51□□□□□ -1.69
COL15A1P39059 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms