Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNU6-522P-201ENST00000364497 107 ntBASIC4.34□□□□□ -1.71
CD40P25942 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD40P25942 RNU6-550P-201ENST00000391057 101 ntBASIC4.34□□□□□ -1.71
CD40P25942 RNU6-387P-201ENST00000411331 105 ntBASIC4.34□□□□□ -1.71
CD40P25942 MTND3P8-201ENST00000412909 339 ntBASIC4.34□□□□□ -1.71
CD40P25942 NDUFB4P5-201ENST00000415445 361 ntBASIC4.34□□□□□ -1.71
CD40P25942 AF186996.5-201ENST00000418098 904 ntBASIC4.34□□□□□ -1.71
CD40P25942 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.71
CD40P25942 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.34□□□□□ -1.71
CD40P25942 RPL12P18-201ENST00000437175 325 ntBASIC4.34□□□□□ -1.71
CD40P25942 RPS29P9-201ENST00000440360 171 ntBASIC4.34□□□□□ -1.71
CD40P25942 AC091685.2-201ENST00000454924 864 ntBASIC4.34□□□□□ -1.71
CD40P25942 AC092324.1-201ENST00000468671 324 ntBASIC4.34□□□□□ -1.71
CD40P25942 RPL23AP2-201ENST00000471227 466 ntBASIC4.34□□□□□ -1.71
CD40P25942 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.34□□□□□ -1.71
CD40P25942 AC117522.3-201ENST00000507974 584 ntBASIC4.34□□□□□ -1.71
CD40P25942 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.34□□□□□ -1.71
CD40P25942 BTF3P13-201ENST00000513224 490 ntBASIC4.34□□□□□ -1.71
CD40P25942 SNORA31.20-201ENST00000517111 133 ntBASIC4.34□□□□□ -1.71
CD40P25942 MYL12AP1-201ENST00000518490 515 ntBASIC4.34□□□□□ -1.71
CD40P25942 AC105029.1-201ENST00000520250 669 ntBASIC4.34□□□□□ -1.71
CD40P25942 ERHP1-201ENST00000523006 310 ntBASIC4.34□□□□□ -1.71
CD40P25942 AP006587.4-201ENST00000526053 529 ntBASIC4.34□□□□□ -1.71
CD40P25942 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CD40P25942 RANP3-201ENST00000530970 276 ntBASIC4.34□□□□□ -1.71
CD40P25942 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.34□□□□□ -1.71
CD40P25942 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CD40P25942 AL118558.2-201ENST00000556294 238 ntBASIC4.34□□□□□ -1.71
CD40P25942 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.34□□□□□ -1.71
CD40P25942 NDUFB4P11-201ENST00000560510 395 ntBASIC4.34□□□□□ -1.71
CD40P25942 AC005668.1-201ENST00000571142 476 ntBASIC4.34□□□□□ -1.71
CD40P25942 MIR4700-201ENST00000578311 74 ntBASIC4.34□□□□□ -1.71
CD40P25942 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.34□□□□□ -1.71
CD40P25942 AC008521.1-201ENST00000587471 187 ntBASIC4.34□□□□□ -1.71
CD40P25942 AC007619.2-201ENST00000605743 379 ntBASIC4.34□□□□□ -1.71
CD40P25942 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.34□□□□□ -1.71
CD40P25942 AL132765.2-201ENST00000610812 351 ntBASIC4.34□□□□□ -1.71
CD40P25942 uc_338.5-201ENST00000611839 155 ntBASIC4.34□□□□□ -1.71
CD40P25942 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CD40P25942 RMST_7.1-201ENST00000621935 268 ntBASIC4.34□□□□□ -1.71
CD40P25942 AC091953.3-201ENST00000623220 236 ntBASIC4.34□□□□□ -1.71
CD40P25942 TPTEP1-208ENST00000636884 213 ntBASIC4.34□□□□□ -1.71
CD40P25942 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD40P25942 AL442639.1-201ENST00000625030 1899 ntBASIC4.34□□□□□ -1.71
CD40P25942 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD40P25942 AL365440.1-201ENST00000436135 2167 ntBASIC4.34□□□□□ -1.72
CD40P25942 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CD40P25942 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CD40P25942 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CD40P25942 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CD40P25942 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CD40P25942 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CD40P25942 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CD40P25942 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CD40P25942 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
CD40P25942 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CD40P25942 AC074029.4-201ENST00000624796 1859 ntBASIC4.33□□□□□ -1.72
CD40P25942 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CD40P25942 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.33□□□□□ -1.72
CD40P25942 TPTE2P4-201ENST00000258589 1605 ntBASIC4.33□□□□□ -1.72
CD40P25942 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CD40P25942 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CD40P25942 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CD40P25942 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CD40P25942 SNORA70.10-201ENST00000384515 134 ntBASIC4.33□□□□□ -1.72
CD40P25942 RNU4-46P-201ENST00000410818 138 ntBASIC4.33□□□□□ -1.72
CD40P25942 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.33□□□□□ -1.72
CD40P25942 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CD40P25942 MTATP6P4-201ENST00000427725 675 ntBASIC4.33□□□□□ -1.72
CD40P25942 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CD40P25942 AL049745.1-201ENST00000433953 286 ntBASIC4.33□□□□□ -1.72
CD40P25942 RPL26P6-201ENST00000440913 438 ntBASIC4.33□□□□□ -1.72
CD40P25942 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.33□□□□□ -1.72
CD40P25942 NEFMP1-201ENST00000443423 1006 ntBASIC4.33□□□□□ -1.72
CD40P25942 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.33□□□□□ -1.72
CD40P25942 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.33□□□□□ -1.72
CD40P25942 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.33□□□□□ -1.72
CD40P25942 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.33□□□□□ -1.72
CD40P25942 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.33□□□□□ -1.72
CD40P25942 RPL21P8-201ENST00000465083 535 ntBASIC4.33□□□□□ -1.72
CD40P25942 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.33□□□□□ -1.72
CD40P25942 RN7SL441P-201ENST00000492388 296 ntBASIC4.33□□□□□ -1.72
CD40P25942 RPS27AP13-201ENST00000498403 237 ntBASIC4.33□□□□□ -1.72
CD40P25942 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.33□□□□□ -1.72
CD40P25942 FGF7P4-201ENST00000509595 295 ntBASIC4.33□□□□□ -1.72
CD40P25942 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.33□□□□□ -1.72
CD40P25942 AC098591.2-201ENST00000510152 315 ntBASIC4.33□□□□□ -1.72
CD40P25942 GMPSP1-201ENST00000514075 579 ntBASIC4.33□□□□□ -1.72
CD40P25942 RNU6-123P-201ENST00000516163 102 ntBASIC4.33□□□□□ -1.72
CD40P25942 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.33□□□□□ -1.72
CD40P25942 AC012339.2-201ENST00000523996 453 ntBASIC4.33□□□□□ -1.72
CD40P25942 AL137161.1-201ENST00000532231 390 ntBASIC4.33□□□□□ -1.72
CD40P25942 CBX3P7-201ENST00000532876 502 ntBASIC4.33□□□□□ -1.72
CD40P25942 AC027369.5-201ENST00000533838 755 ntBASIC4.33□□□□□ -1.72
CD40P25942 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.33□□□□□ -1.72
CD40P25942 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.33□□□□□ -1.72
CD40P25942 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.33□□□□□ -1.72
CD40P25942 RPL23AP84-201ENST00000571193 464 ntBASIC4.33□□□□□ -1.72
CD40P25942 AC019322.1-201ENST00000571869 389 ntBASIC4.33□□□□□ -1.72
CD40P25942 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms