Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VAMP1P23763 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
VAMP1P23763 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
VAMP1P23763 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
VAMP1P23763 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VAMP1P23763 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
VAMP1P23763 RNU4-79P-201ENST00000362764 141 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 RNA5SP485-201ENST00000365053 119 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VAMP1P23763 MIR34A-201ENST00000385130 110 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.83□□□□□ -1.64
VAMP1P23763 MTCO2P27-201ENST00000420740 428 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 AL445928.1-201ENST00000435545 222 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.83□□□□□ -1.64
VAMP1P23763 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.83□□□□□ -1.64
VAMP1P23763 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC4.83□□□□□ -1.64
VAMP1P23763 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.83□□□□□ -1.64
VAMP1P23763 AC233279.1-201ENST00000455300 423 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 AC117503.1-201ENST00000472241 394 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 AC022493.1-201ENST00000492984 337 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
VAMP1P23763 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.83□□□□□ -1.64
VAMP1P23763 RNU6-1088P-201ENST00000516850 104 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 AC025755.1-201ENST00000521306 278 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.83□□□□□ -1.64
VAMP1P23763 AC103855.4-201ENST00000533158 265 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 AC026371.1-201ENST00000551867 419 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.83□□□□□ -1.64
VAMP1P23763 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.83□□□□□ -1.64
VAMP1P23763 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.83□□□□□ -1.64
VAMP1P23763 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.83□□□□□ -1.64
VAMP1P23763 OR1M4P-201ENST00000589199 287 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 NANOGP3-201ENST00000605855 286 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 AL110115.1-201ENST00000614396 364 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 AC004825.2-201ENST00000616634 455 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VAMP1P23763 AC027309.3-201ENST00000623419 351 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.83□□□□□ -1.64
VAMP1P23763 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VAMP1P23763 A2MP1-204ENST00000566278 4130 ntBASIC4.83□□□□□ -1.64
VAMP1P23763 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VAMP1P23763 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VAMP1P23763 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
VAMP1P23763 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.83□□□□□ -1.64
VAMP1P23763 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.83□□□□□ -1.64
VAMP1P23763 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VAMP1P23763 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VAMP1P23763 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
VAMP1P23763 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.82□□□□□ -1.64
VAMP1P23763 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VAMP1P23763 AP001642.1-201ENST00000624727 2117 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VAMP1P23763 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.82□□□□□ -1.64
VAMP1P23763 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VAMP1P23763 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VAMP1P23763 SNORD116-11-201ENST00000383882 92 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 MIR188-201ENST00000385034 86 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VAMP1P23763 AL157702.1-201ENST00000398764 426 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 AL591034.1-201ENST00000407447 340 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 AF186996.5-201ENST00000418098 904 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 AL353621.1-201ENST00000418219 243 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 RPL35AP31-201ENST00000418340 337 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.82□□□□□ -1.64
VAMP1P23763 PPIAP23-201ENST00000420099 497 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 EIF4EP1-201ENST00000422311 642 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 MTND1P14-201ENST00000427400 950 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
VAMP1P23763 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.82□□□□□ -1.64
VAMP1P23763 AL359672.1-201ENST00000442302 409 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 AC023141.8-201ENST00000442554 208 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 ARL2BPP10-201ENST00000446487 531 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 TREML3P-201ENST00000457327 501 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 AC092865.4-201ENST00000477936 615 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 COX6B1P2-201ENST00000489624 230 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 AC105384.2-201ENST00000508433 640 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 AC008526.1-201ENST00000509149 338 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.82□□□□□ -1.64
VAMP1P23763 SNORA31.19-201ENST00000517079 126 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 CASP1P1-201ENST00000526345 212 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.82□□□□□ -1.64
VAMP1P23763 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC4.82□□□□□ -1.64
VAMP1P23763 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC4.82□□□□□ -1.64
VAMP1P23763 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.82□□□□□ -1.64
VAMP1P23763 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC4.82□□□□□ -1.64
VAMP1P23763 AC023043.2-201ENST00000589678 1026 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.82□□□□□ -1.64
VAMP1P23763 AC136601.2-201ENST00000604356 474 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 AC245389.1-201ENST00000605141 529 ntBASIC4.82□□□□□ -1.64
VAMP1P23763 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.82□□□□□ -1.64
VAMP1P23763 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.82□□□□□ -1.64
VAMP1P23763 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.82□□□□□ -1.64
VAMP1P23763 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.82□□□□□ -1.64
VAMP1P23763 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VAMP1P23763 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VAMP1P23763 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VAMP1P23763 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.82□□□□□ -1.64
VAMP1P23763 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VAMP1P23763 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms